Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00618 ATGGGGTGCTTGTCACTACTTAGCTCATCTCCTCTGAGCAGTCCTTGGCAGTATGGCTCGAGTTCTTCTTCAACCTCATGTAGAAGGCAATTCACTGCAGTGTCCTGCAGAGCCACAAGGCAGACTGCAACATGTGCGGTTACCAGCAGCAGTAACAGCAATTTCTACAAGGTGCTGTCTCTAAGTACAAAGAGTGCAACGACCGATGAAATCAAAAGGGCCTATAGGTCAATGGCTCTTAGGTATCATCCTGATTTATGTCATGATCCTTCATTGAAGGAAGAGTCCACCAAGATGTTTGTTCTGCTGAATGAAGCTTACAGAACACTGACGAATCCATCTCTGCGCCAAGAGTACGATGATTGCGAGATGGGTTCGAGATCAAGCATGGAGGTGAGTAGGAAAAGGTGGCAAGATCAGATTGCGGAGTTGAAGAGAAGGGCTGCAGGTTCAGGCATGGAAGGAAAGAGAGGATCATGGGGCAGCAGAATGAGAGCTAAAAGCAAAGAAAGAGTTGTTTAG 522 0.4693 MGCLSLLSSSPLSSPWQYGSSSSSTSCRRQFTAVSCRATRQTATCAVTSSSNSNFYKVLSLSTKSATTDEIKRAYRSMALRYHPDLCHDPSLKEESTKMFVLLNEAYRTLTNPSLRQEYDDCEMGSRSSMEVSRKRWQDQIAELKRRAAGSGMEGKRGSWGSRMRAKSKERVV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00618 173 PRINTS DnaJ domain signature 75 90 IPR001623 -
Pte5g00618 173 PRINTS DnaJ domain signature 95 115 IPR001623 -
Pte5g00618 173 PRINTS DnaJ domain signature 57 75 IPR001623 -
Pte5g00618 173 Coils Coil 127 147 - -
Pte5g00618 173 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Pte5g00618 173 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 20 170 - -
Pte5g00618 173 Pfam DnaJ domain 54 120 IPR001623 -
Pte5g00618 173 SUPERFAMILY Chaperone J-domain 24 119 IPR036869 -
Pte5g00618 173 CDD DnaJ 54 112 IPR001623 -
Pte5g00618 173 MobiDBLite consensus disorder prediction 146 173 - -
Pte5g00618 173 Gene3D DnaJ domain 41 146 IPR036869 -
Pte5g00618 173 SMART dnaj_3 53 115 IPR001623 -
Pte5g00618 173 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00618 Pte-Chr5 7175344 7175938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00618 56 120 C2H2 Transcription Factor Family AT1G74250 43.284 1.01e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00618 - - qsa:O6P43_012313 149.443