Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00613 ATGGGGTGCTTGTCACTACTTAGCTCATCTCCTCTGAGCAGTCCTTGGCAGTATGGCTCGAGTTCTTCTTCAACCTCATGTAGAAGGCAATTCACTGCAGTGTCCTGCAGAGCCACAAGGCAGACTGCAACATGTGCGGTTACCAGCAGCGGCAGTAACAGCAATTTCTACAAGGTGCTGTCTCTAAGTACAAAGAGTGCAACGACCGATGAAATCAAAAGGGCCTATAGGTCAATGGCTCTTAGGTATCATCCTGATTTATGTCATGATCCTTCATTGAAGGAAGAGTCCACCAAGATGTTTGTTCTGCTGAATGAAGCTTACAGAACACTGACGAATCCATCTCTGCGCCAAGAGTACGATGATTGCGAGATGGGTTCGAGATCAAGCATGGAGGTGAGTAGGAAAAGGTGGCAAGATCAGATTGCGGAGTTGAAGAGAAGGGCTGCAGGTTCAGGCATGGAAGGAAAGAGAGGATCATGGGGCAGCAGAATGAGAGCTAAAAGCAAAGAAAGAGTTGTTTAG 525 0.4724 MGCLSLLSSSPLSSPWQYGSSSSSTSCRRQFTAVSCRATRQTATCAVTSSGSNSNFYKVLSLSTKSATTDEIKRAYRSMALRYHPDLCHDPSLKEESTKMFVLLNEAYRTLTNPSLRQEYDDCEMGSRSSMEVSRKRWQDQIAELKRRAAGSGMEGKRGSWGSRMRAKSKERVV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00613 174 CDD DnaJ 55 113 IPR001623 -
Pte5g00613 174 MobiDBLite consensus disorder prediction 147 174 - -
Pte5g00613 174 SUPERFAMILY Chaperone J-domain 26 120 IPR036869 -
Pte5g00613 174 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 20 171 - -
Pte5g00613 174 Gene3D DnaJ domain 42 147 IPR036869 -
Pte5g00613 174 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Pte5g00613 174 Coils Coil 128 148 - -
Pte5g00613 174 SMART dnaj_3 54 116 IPR001623 -
Pte5g00613 174 PRINTS DnaJ domain signature 96 116 IPR001623 -
Pte5g00613 174 PRINTS DnaJ domain signature 58 76 IPR001623 -
Pte5g00613 174 PRINTS DnaJ domain signature 76 91 IPR001623 -
Pte5g00613 174 Pfam DnaJ domain 55 121 IPR001623 -
Pte5g00613 174 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00613 Pte-Chr5 7003069 7003667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00613 57 121 C2H2 Transcription Factor Family AT1G74250 43.284 9.55e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00613 - - qsa:O6P43_012313 151.369