Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00602 ATGCAAGCATCAGAGCAGCATAAGGGTTCAGGCTTGTCCAATGGGTTGTATTATCAACCTATTCAGCAAATTGGAGCCTACTGTTTGCCCCATATCAGAAACTTAAATGGTTCCAATAATCAGATCCATTATGACCATGTTCAACACATGTCAAGTCCTATTTCCAGCGGGGTTTACTGCACATTGGAGTCATCGTCTGCAAGTGGCAGTTACAAAGTCTACAATTCTCCATCGATTGTTAGTTTCTCCCCTAATGGAAGCCCAATATCACAGCCAGACTCTCAGACATATCCACCTGATCAGCACCATACTGCTGATAACATCTATGGCTCTCCAATGAGCGGGTCCTGCATTACTGATGATGCTAATGACTTAAAGCACAAACTAAGAGAATTGGAATCAGTAATGCTAGGTCCTGATTCTGATAATCTTGACAGCTATGAAAGCACATTCAATAATGTTACAAACAATATGTCACCTGAAATGGAAAGCTGGAGACAAATCGTGGATGCCATCTCAAGTAGGGACTTGAAAAAGGTACTGATTTCATGTTCAAAAGCAGTTGCTGATAATGATCTGTTGATGGCACAATGGTTGATGGATGAACTGAGACAAATGGTTTCAGTCTCCGGTGAGCCGATTCAAAGGTTGGGGGCATACATGTTGGAAGGTCTAGTAGCGCGGTTCACCTCTTCTGGGAGTTCAATCTACAAAGCTTTGAGATGCAAGGAACCAGCAAGCTCTGAGCTGCTCTCTTACATGCACATACTCTATGAAGTTTGTCCATACTTTAAGTTTGGTTACATGTCTGCAAATGGAGCCATTGCAGAAGCAATGAAAGACGAAAAGCGAGTTCACATCATTGATTTCCAGATTGCTCAAGGGAGTCAGTGGATCACTCTCATTCAAGCTTTTGCAGCTAGGCCTGGTGGACCACCGCACATTCGCATTACCGGCATTGATGATTCCACATCAGCTTATGCCCGTGGAGGAGGATTGAGCATAGTGGGGAAGAGATTATCCAAGCTTGCTGAATCATTTAAGGTACCATTTGAATTTCAAGCTGCAGATATCTCCGGTTGTGATGTAAAGATAGAAAACCTCGGGATTCGACATGGAGAGGCTCTTGCTGTAAATTTTGCATTTATGCTGCACCACATGCCTGATGAGAGTGTCAGCACTCAGAACCACAGGGACAGGCTGCTGCATATGGTGAAGAGCCTGTCTCCAAAAGTACTGACACTGGTTGAGCAGGAATCTAACACCAATACTGCACCGTTTTTTCCTCGGTTCCTCGAGACTCTAGATTACTACACAGCTATGTTCGAGTCAATCGATGTGACCCTTCCAAGGGAACATAAGGAGCGGATCAATGTTGAGCAGCATTGTCTAGCAAGGGATGTTGTTAACATTATAGCTTGTGAGGGGGCTGAGAGAGTTGAAAGGCATGAACTACTTGGGAAGTGGAGGTCAAGGTTTGCAATGGCTGGTTTTATTCCATACCCTCTCAGTTCGTTAGTGAATGCCACCATCAAAACTCTGCTTGAGAACTACTCCAACAAATATAGGCTTGAAGAAAGAGACGGAGCTCTCTATCTTGGTTGGATGAACAGAGATTTGGTTGCTTCGTGTGCATGGAAATGA 1644 0.4404 MQASEQHKGSGLSNGLYYQPIQQIGAYCLPHIRNLNGSNNQIHYDHVQHMSSPISSGVYCTLESSSASGSYKVYNSPSIVSFSPNGSPISQPDSQTYPPDQHHTADNIYGSPMSGSCITDDANDLKHKLRELESVMLGPDSDNLDSYESTFNNVTNNMSPEMESWRQIVDAISSRDLKKVLISCSKAVADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARFTSSGSSIYKALRCKEPASSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEKRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLSIVGKRLSKLAESFKVPFEFQAADISGCDVKIENLGIRHGEALAVNFAFMLHHMPDESVSTQNHRDRLLHMVKSLSPKVLTLVEQESNTNTAPFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDVVNIIACEGAERVERHELLGKWRSRFAMAGFIPYPLSSLVNATIKTLLENYSNKYRLEERDGALYLGWMNRDLVASCAWK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00602 547 MobiDBLite consensus disorder prediction 84 105 - -
Pte5g00602 547 Pfam GRAS domain family 177 547 IPR005202 -
Pte5g00602 547 ProSiteProfiles GRAS family profile. 168 547 IPR005202 -
Pte5g00602 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00602 Pte-Chr5 6875677 6877320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00602 92 548 GRAS Transcription Factor Family AT5G48150 75.162 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g00602 GRAS 6.6e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00602 - - qsa:O6P43_014489 917.916