Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00572 ATGATACTAGAGGAAATTCAACAGAGTCGCCACCAGCAACAACAACTGCAGCACCAGTCGAAGAAGCATCCATATCAGCAGCAGCAAGTAGAGATGTGTAAAAAGATGGCACTCGATGCAGCTGTTGCAGTGGAGCGGAACCAGCAGGCTGCCTTGACAGAAGGCTTTGACAGTGCTGTCGTGGATGGGGGTGAAGACCTTCTCATTCCACCCCTTAATTTTGCTATGGTGGATAACGGCATTTTCAGGTCTGGCTTCCCTGAATTGTCCAACTTCTCATTCCTTCAAGCCCTCGGCCTCCGCTCGATCATATGTCTCTGTCCTGAGCCGTACCCAGAGGCCAACGTGGAGTTCCTTAAGACCAATGGGATCAAGCTTTACCAATTTGGGATTGAAGGCTACAAGGAACCATTCTTAAAAATCTCAGAGGATATGATACGAGAAGCACTGAAAGTCGTGCTTGGTATATTGAGCTACACCATTCTTAAACATTGCTTCTTTTCAGAACATCGAACTGGATGTGTTGTAGGATGCTTAAGAAGAATGCAGAAATGGTGCCTATCATCTGTGTTTGATGAATATCAGCGCTTTGCTGCTGCGAAGGCAAGAGTTTCAGATCAAAGATTCATTGAGCTGTTTGATGTTTCCACCTTGAGACTGAATGTTTTTCCAACCACATTCTCATGCTCAGAAAGATAG 699 0.4549 MILEEIQQSRHQQQQLQHQSKKHPYQQQQVEMCKKMALDAAVAVERNQQAALTEGFDSAVVDGGEDLLIPPLNFAMVDNGIFRSGFPELSNFSFLQALGLRSIICLCPEPYPEANVEFLKTNGIKLYQFGIEGYKEPFLKISEDMIREALKVVLGILSYTILKHCFFSEHRTGCVVGCLRRMQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDVSTLRLNVFPTTFSCSER* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00572 232 Gene3D Protein tyrosine phosphatase superfamily 67 217 IPR029021 -
Pte5g00572 232 ProSiteProfiles Dual specificity protein phosphatase domain profile. 73 229 IPR020422 GO:0006470|GO:0008138
Pte5g00572 232 Pfam Tyrosine phosphatase family 68 217 IPR004861 -
Pte5g00572 232 CDD PFA-DSP_Siw14 67 214 - -
Pte5g00572 232 PANTHER TYROSINE-PROTEIN PHOSPHATASE 32 227 - -
Pte5g00572 232 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 68 214 IPR029021 -
Pte5g00572 232 FunFam probable tyrosine-protein phosphatase At1g05000 67 217 - -
Pte5g00572 232 PRINTS Plant and fungal dual specificity phosphatase signature 141 155 IPR020428 GO:0016791
Pte5g00572 232 PRINTS Plant and fungal dual specificity phosphatase signature 105 118 IPR020428 GO:0016791
Pte5g00572 232 PRINTS Plant and fungal dual specificity phosphatase signature 124 138 IPR020428 GO:0016791
Pte5g00572 232 PRINTS Plant and fungal dual specificity phosphatase signature 68 85 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00572 Pte-Chr5 6331329 6334183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00572 63 232 Protein tyrosine phosphatase (PTP) family AT4G03960 65.294 1.03e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00572 K18045 - qsa:O6P43_020789 284.648