Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00526 ATGACAGATCCATTAGATGAATATAAGAAGGCTATCATATCCATTGTTGAGGAATACTTCAACACTGGAGGCGTGGATTTGGCAGCATCTACCCTCAAAGAATATGGGTTTAGTGAATACCATTCTTACTTCATCAAGTGGCCCATCTTCATGTCTATGGACAAGCATGATGAAAAGAAAGAAATGGCAAGTAGTTCTGCTTTCAGCCTTGTATCTGATGTGATAAGTCCTATTCAAATAAGGGATGGATTCCTTATACTTCTTGAATCAACTGATGACCTCGCAGTTGGCATCCTTGCTCTATTTCTAGCATGTGTTCTTGTTGATGACATCCTTCCTCCAGCTTTCCTCTTGAGGGCTCAGAAGACTCTCTCAGAATCTTCTAAAGGAGTCCAGGTTATCTAG 405 0.4074 MTDPLDEYKKAIISIVEEYFNTGGVDLAASTLKEYGFSEYHSYFIKWPIFMSMDKHDEKKEMASSSAFSLVSDVISPIQIRDGFLILLESTDDLAVGILALFLACVLVDDILPPAFLLRAQKTLSESSKGVQVI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00526 134 Gene3D - 2 134 - -
Pte5g00526 134 SUPERFAMILY ARM repeat 5 129 IPR016024 -
Pte5g00526 134 ProSiteProfiles MI domain profile. 7 122 IPR003891 -
Pte5g00526 134 PANTHER PROGRAMMED CELL DEATH 4 2 134 IPR039778 GO:0045892
Pte5g00526 134 SMART ma3_7 8 113 IPR003891 -
Pte5g00526 134 Pfam MA3 domain 9 113 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00526 Pte-Chr5 5594559 5594988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00526 14 98 Eukaryotic Initiation Factors Gene Family AT5G57870 30.233 4.21e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00526 - - jre:109012431 175.637