Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00516 ATGGCAGTGCAGATTTTCTGCACTGAATGCAGAAACCCAGTGCTGCATAGGGTAGGAGGAGGAAGGTATACTTGGGCTCCCAACATGAATTTCTCAGAATGGACAAGTCATGAGAAGTTCTATCTGGGTGATTGGAAGCTGTACAATGTTTTAGAGGTGAACAAGACAAGCTATGACAACTGCATTGACAAGAACTTCATAGTGAATATAACAAGAGGAGGGAGAGATGTGGTTCAACTCACAGAGGTGAAGACATATTACTTTCTTAGTGGAAGAGGGTACTGCTTCATGGGGATGAAAGTTGCAATCACAGTAGAAGATCCACCAACCAGTATTATTCCAGCACCCATTCTAGTTAGCAATGGTTGTTTGTCTCGATCGGACAAAATGATCAGTAGCAGACTACTTCCATTGCTGTTCTTGATAGGTTTTGTCTGA 438 0.4247 MAVQIFCTECRNPVLHRVGGGRYTWAPNMNFSEWTSHEKFYLGDWKLYNVLEVNKTSYDNCIDKNFIVNITRGGRDVVQLTEVKTYYFLSGRGYCFMGMKVAITVEDPPTSIIPAPILVSNGCLSRSDKMISSRLLPLLFLIGFV* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00516 145 ProSiteProfiles Phytocyanin domain profile. 14 107 IPR003245 GO:0009055
Pte5g00516 145 FunFam Lamin-like protein 12 108 - -
Pte5g00516 145 Pfam Plastocyanin-like domain 25 99 IPR003245 GO:0009055
Pte5g00516 145 Gene3D - 14 109 IPR008972 -
Pte5g00516 145 SUPERFAMILY Cupredoxins 15 105 IPR008972 -
Pte5g00516 145 PANTHER BLUE COPPER PROTEIN 16 106 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00516 Pte-Chr5 5500222 5500792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00516 15 111 Phytocyanin Superfamily AT2G27035 57.547 2.86e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00516 - - qsa:O6P43_014616 193.356