Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00512 ATGGCTTCTAGAGCTATAGAACCGAATGAAGCACCAGAAAGAGCTCAACTTAGGCAAAAGATTGGAGCTTTAGAAGGAAGGAACAGACGGGTGCTCCAGGATATTGGTAACTTTGTGCCAGAGAAAGCAGACAAACAGACAAACAATTTATCTAAGCCGACAAATAGGAATTTTGGTGCTCAACTGCTGCCCAACACACAAGCAGAGAAGAACAAGAAATTAATCCCACAAGTTGCGAGTGGCGCTGTTGATATCATAACTGGTGGCGTTGCAAAGGTGGCAGTGGCTGATAAGAAGGCAGAACATGAAGTTATTATAATAAGCTCTGATGATGATTCTGATGAAGAGAGTTGGAAGAAACATGCTTCTGAAAGGAAGTCTAGAAAAAATGGGAAAGCTTTTAGTTCAGTTCTCTCTGCTAGAAGCAAGGTTGCTTGTGGATTTACTAAGAAGCTAAAAGATCGCATTGTAGACATTGATGCTGCAGACATTCACAATGAATTGGCAGCAGTTGAATACATTGATGACATCTACAAATTTTACAAACAGACAGAAGATGAAAGCCGAGTGGCTGATTACATGGGCTCACAGCCAGATATCAACGCCAAGATGAGGTCCATTCTGGTGGACTGGTTGGTAGATGTGCATCGCAAATTTGAACTCATGCCAGAGACCTTATATCTCACAGTAAATATTGTGGACCGATTCTTGTCGATGAAAACTGTGCCAAGGAAAGAACTCCAGCTGGTTGGCATGAGCGCAATGCTCATAGCGTGCAAATATGAAGAAATTTGGGCACCAGAGGTCAATGACTTTGTCTGCATTTCTGACAAGGCCTATGTTAGGGAGCAAGTTCTGGCCATGGAGAAAGCAATCTTGGGGAAGTTGCAATGGTATCTTACAGTTCCAACACCATATGTGTTCCTTGTTCGATATACTAAAGCCTCTGTTCCATCCGAAGAGGTGGAGAATATGGTGTTTTTCCTTGCTGAGCTTAGCCTGATGGACTACCCTACTGCAATTATGTACTGCCCTTCATTAATTGCTGCCTCTGCTGTCTACGCTGCTCGCTGCACCCTTAACAAGAACCCTTTCTGGACTGAAACTCTAAAGCACCACGCTGGCTACTCTGAACATCAACTGATGGAATGTGCGAAGCACATGGTCAGCTTGCACTCTGCAGCACCAGAAAGCAAATTGAGGGCAGTCTACCGAAAATTCTCTAGTCCAGACCGTGGTGCTGTTGCCCTTCTTACCCCAGCCAAAAGTCTCTTATAA 1278 0.4405 MASRAIEPNEAPERAQLRQKIGALEGRNRRVLQDIGNFVPEKADKQTNNLSKPTNRNFGAQLLPNTQAEKNKKLIPQVASGAVDIITGGVAKVAVADKKAEHEVIIISSDDDSDEESWKKHASERKSRKNGKAFSSVLSARSKVACGFTKKLKDRIVDIDAADIHNELAAVEYIDDIYKFYKQTEDESRVADYMGSQPDINAKMRSILVDWLVDVHRKFELMPETLYLTVNIVDRFLSMKTVPRKELQLVGMSAMLIACKYEEIWAPEVNDFVCISDKAYVREQVLAMEKAILGKLQWYLTVPTPYVFLVRYTKASVPSEEVENMVFFLAELSLMDYPTAIMYCPSLIAASAVYAARCTLNKNPFWTETLKHHAGYSEHQLMECAKHMVSLHSAAPESKLRAVYRKFSSPDRGAVALLTPAKSLL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00512 425 CDD CYCLIN_AtCycB-like_rpt2 303 420 - -
Pte5g00512 425 Pfam Cyclin, N-terminal domain 176 300 IPR006671 -
Pte5g00512 425 FunFam G2/mitotic-specific cyclin 189 296 - -
Pte5g00512 425 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Pte5g00512 425 PANTHER CYCLINS 124 406 IPR039361 -
Pte5g00512 425 Pfam Cyclin, C-terminal domain 303 420 IPR004367 -
Pte5g00512 425 FunFam G2/mitotic-specific cyclin-1 297 416 - -
Pte5g00512 425 Gene3D - 190 301 - -
Pte5g00512 425 SMART Cyclin_C_2 303 421 IPR004367 -
Pte5g00512 425 SMART cyclin_7 307 390 IPR013763 -
Pte5g00512 425 SMART cyclin_7 210 294 IPR013763 -
Pte5g00512 425 CDD CYCLIN_AtCycB-like_rpt1 153 298 - -
Pte5g00512 425 Coils Coil 14 34 - -
Pte5g00512 425 SUPERFAMILY Cyclin-like 302 422 IPR036915 -
Pte5g00512 425 SUPERFAMILY Cyclin-like 165 300 IPR036915 -
Pte5g00512 425 PIRSF Cyclin_A_B_D_E 2 425 IPR046965 GO:0016538|GO:0044772
Pte5g00512 425 Gene3D - 176 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00512 Pte-Chr5 5459784 5462828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00512 53 418 Core Cell Cycle Gene Families AT2G26760 57.487 2.02e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00512 K21777 - qsa:O6P43_014681 548.51