Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00494 ATGGGCAATTGTTGCTCTCAAGGCAACGCTGATGCCCCAGCTGAAACCGACAAGGGAGAAAACAACTTAGCCGATAACAGCCATTCAGGTAATGGCTCAGCCGCAGGAGAGAGAACCACCCCACCACATGCAAAGCCTTCTCACTCCCCACCTAAGCCCGTCAAGCAGTCCCCCATCGGACCAATAGTCCACACTTGCCATTCTCTGGGTGTCATTCATAGGGATCTCAAACCCGAGAATTTCCTTTTGTTGAATAAGGATGAAGACTCCCCACTCAAGGCTACAGACTTTGGTCTATCTGTATTTTATAAGCAAGGTGAAGTATTCAAAGATATAGTTGGCAGCGCATACTACATTGCACCAGAAGTCTTGAAGAGGAGATATGGACCTGAAGTTGATATATGGAGTGTAGGAGTCATGCTATACATTCTACTAAGTGGTGTTCCTCCATTTTGGGCAGAATCTGAACATGGTATATTCAATGCTATCCTGCGTGGTCACATTGATTTCTCCAGCGACCCGTGGCCCTCCATTTCACCTCAAGCCAAAGATCTTGTCAGAAAAATGTTGCACTCAGATCCCAAGCAGAGACTGACCGCATACCAAGTACTTAATCATCCATGGATTAAGGAGGATGGAGAGGCCCCAGATGTTCCTCTTGACAATGCAGTATTGAGTAGACTAAAGCAGTTTAGAGCAATGAACAAATTCAAGAAAGTTGCGCTGAAGGTTATCGCCGGATGCTTATCGGAGGAAGAAATTAGGGGATTGAAGGAGATGTTCAAGAGCATGGATACTGATAACAGTGGGACAATCACACTCGAAGAGCTGAAGCAAGGGCTTGCTAAGCAAGGAACAAAACTGACGGAGTCCGAAGTCAAGCAACTCATGGAAGCAGCTGATGCAGATGGCAATGGAACGATAGATTACGATGAATTCATTACGGCAACGATGCACTTGAACAGAATGGATAGAGAAGAGCATCTTTATACTGCTTTCCAGTACTTCGACAAAGATAACAGCGGGTTCATCACCGTGGAAGAGCTAGAGCAAGCTCTCATTGAATATGGCATGGAAGATGAGAAGGAGATAAAGGAAATCATTGCAGAGGTTGATGCAGATAATGATGGCCGGATCAACTACGATGAATTTGTAGCCATGATGAGAAAAGGAAACCCCGAACCAAATGCACTAAAGAAGAGACGATCTGAGATATTTGTATGA 1224 0.4502 MGNCCSQGNADAPAETDKGENNLADNSHSGNGSAAGERTTPPHAKPSHSPPKPVKQSPIGPIVHTCHSLGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLSGVPPFWAESEHGIFNAILRGHIDFSSDPWPSISPQAKDLVRKMLHSDPKQRLTAYQVLNHPWIKEDGEAPDVPLDNAVLSRLKQFRAMNKFKKVALKVIAGCLSEEEIRGLKEMFKSMDTDNSGTITLEELKQGLAKQGTKLTESEVKQLMEAADADGNGTIDYDEFITATMHLNRMDREEHLYTAFQYFDKDNSGFITVEELEQALIEYGMEDEKEIKEIIAEVDADNDGRINYDEFVAMMRKGNPEPNALKKRRSEIFV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00494 407 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Pte5g00494 407 FunFam Calcium-dependent protein kinase 5 54 217 - -
Pte5g00494 407 ProSitePatterns EF-hand calcium-binding domain. 301 313 IPR018247 -
Pte5g00494 407 ProSiteProfiles EF-hand calcium-binding domain profile. 288 323 IPR002048 GO:0005509
Pte5g00494 407 ProSiteProfiles EF-hand calcium-binding domain profile. 324 358 IPR002048 GO:0005509
Pte5g00494 407 Gene3D - 219 392 - -
Pte5g00494 407 Pfam Protein kinase domain 63 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00494 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Pte5g00494 407 Gene3D Transferase(Phosphotransferase) domain 1 59 218 - -
Pte5g00494 407 SUPERFAMILY EF-hand 249 390 IPR011992 -
Pte5g00494 407 Pfam EF-hand domain pair 257 317 IPR002048 GO:0005509
Pte5g00494 407 Pfam EF-hand domain pair 326 389 IPR002048 GO:0005509
Pte5g00494 407 MobiDBLite consensus disorder prediction 1 59 - -
Pte5g00494 407 SUPERFAMILY Protein kinase-like (PK-like) 63 233 IPR011009 -
Pte5g00494 407 SMART serkin_6 4 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00494 407 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00494 407 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 384 - -
Pte5g00494 407 ProSitePatterns EF-hand calcium-binding domain. 265 277 IPR018247 -
Pte5g00494 407 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Pte5g00494 407 FunFam Calcium-dependent protein kinase 1 217 392 - -
Pte5g00494 407 ProSiteProfiles EF-hand calcium-binding domain profile. 252 287 IPR002048 GO:0005509
Pte5g00494 407 SMART efh_1 256 284 IPR002048 GO:0005509
Pte5g00494 407 SMART efh_1 328 356 IPR002048 GO:0005509
Pte5g00494 407 SMART efh_1 363 391 IPR002048 GO:0005509
Pte5g00494 407 SMART efh_1 292 320 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00494 Pte-Chr5 5040523 5043370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00494 62 405 EF-hand Containing Proteins AT5G12180 86.047 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte5g00494 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00494 K13412 - csv:101205429 632.484