Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00493 ATGCAGGGGTTGCAATGGCCTGGCCTCTTTCACATTCTGGCTTCCAGACCCGGCGGTCCACCATACGTACGGCTCACTGGGTTGGGGTCATCCATGGAAGCTTTGGAGGCTATCCGAAAATGCCTGTCTAATTTTGGTGAGAAATTAGGGTTACCGTTTGAGTTATTTATTCTGGTGGCCAAGAAAATTGGCAATCTGAATCTTGAAAGACTGAACGTGACGAAATCCGAGGTGGTTGCTGTTCACTGGTTACAACATTCTCTGTACGATGTCACTGGCTCAGACCAAAATACACTGTGGCTTTTGCAGAGATTGGCACCAAAAGTTGTGACTGTGGTGGAGCAGGACCTGAGCCATGCAGGCTCATTCCTAGGGCGGTTTGTAGAAGCCATCCACTATTACTCAGCACTATTCGATTCCCTGGGAGCAAGCTATGGAGAAGAGAGCGAGGAACGTCATGTAGTAGAACAGCAACTTCTCTCTAGAGAGATTCGTAACGTGCTTGCAGTTGGAGGGCCTTCAAGAACTGGAGATCTCAAGTTTCATAACTGGAGGGAGAAGCTTCAGCAATCTGGGTTCAAAGGCATTTCTCTTTCTGGCAATGCTGCCACTCAAGCAACACTCTTACTGGGTATGTTTCCTTCAGATGGATACACCTTGGTGGAAGATAATGGAGCTCTTAAGCTTGGTTGGAAAGACCTTTGCTTGCTGACTGCTTCTGCATGGAGACCATCTTTTCACTCACCTGCTACTAATATCATTCATTCTCATCGTTGA 777 0.4723 MQGLQWPGLFHILASRPGGPPYVRLTGLGSSMEALEAIRKCLSNFGEKLGLPFELFILVAKKIGNLNLERLNVTKSEVVAVHWLQHSLYDVTGSDQNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGDLKFHNWREKLQQSGFKGISLSGNAATQATLLLGMFPSDGYTLVEDNGALKLGWKDLCLLTASAWRPSFHSPATNIIHSHR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00493 258 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 238 IPR005202 -
Pte5g00493 258 ProSiteProfiles GRAS family profile. 1 243 IPR005202 -
Pte5g00493 258 Pfam GRAS domain family 1 243 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00493 Pte-Chr5 5032917 5034416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00493 1 244 GRAS Transcription Factor Family AT3G54220 85.656 6.24e-151 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g00493 GRAS 7e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00493 - - qsa:O6P43_016422 449.514