Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00492 ATGGTGAGAAAGAGGATGGCCTCCGAGATGGAGCTTCACGCCAGCCCCATGGCTATGAATATCATGAACAGCTCCAATGGCGGTTCTGCTGCTGCCAGCAGGTTTTCCCGTCCAAATATAATGGCCGGGTGTTCAGAAATTGACCAATACGTCACCGGAAATCACAACCATAGTTCCAATTCCAATAACAGTAATCATCTTCCACCTCTTGCCACTGATCATCGCCATCAAGGTTTTCTTTCGATAGATAACAGTAGACTTAGCCTGAACCCTAGTACTGGTCTCTGTCCTACTACAAACCCCACCATGACGGCCCCCCATAACTACTCCACTTCTCAGCTCTTAGCTTGTTCAACGAATTTGACCACTTTGACAACTTCAGGTGTGGGGTCTTGTGGTTATTATTTATCATCTTCGTCTTCAAATTCTCCAAATCACTTCAACCATGTTAATACAGAAGGTCTTTGTGGTGGAGAAGACCTCTCACTTCATCCTAATCTTGAAGCACAAAAGCAATCTCAGTTTCAGAGCTGCCGGAGCCAACTGACCCCGGCGCCGGCAGTGTGTGGCTTCTCCGGACTTCCTTTGTTTTCATCTCACAGAACTAGTACTACTCCAGATAGTACTGATCTCGGTGGTGACGGCGGTACTCCTCCCGCCGTCAGTCTCAGCAGCGCTGGGGCTTCTTGTCCAACGGAGTCGACAGTGGCAGCAACAGATAGTAGTGCTGGTCGGGCCAATAGCGGAGTTTCCATGGAAGACGGCGGTGCCTCCGCAACAGCTTGGATCGATGAAATCATCAAGGACCTCATACACAGCTCTACCTCTGTGTCAATTCCTCAGCTCATACACAACGTCCGGGAGATAATCTATCCATGCAATCCTAACCTCGCCATCCTCCTCGAGTACAGGCTTCGTTCACTTTGTTTCTCTACTGCATCTGCATCAACAACTGCAGCTTCCTCCATCACAAACTATCCAATCGAGCAAAACCAAAAGAAACGAATTGAAGAGCATCCTCTTGGGGCTGCCATGGGGTTGCGGCACCGATCCTCACATCAGCAATCATTTTCAAATTTACATCTTCCGGCTGCTGCTCCATCTCAAAACATCCTGAATCAGATGCACTCAAATTGGAATCTAACTTCAGGTCTTGGTAACGAAGCAAACAGTAATCCTTCCATGGTTTCTGCTACACAGTCCGCTCTTCCGCCATGCCCAAATCAATTGGTGCGACCGCAGCAGCAGTCGCAAGAACAACAACAGGATCAAGAGGAAGACTCTCAGTTACCTTCAACCACGATTGCAACTCCTCCATCTTCAGAAGAAACTGAAACAACAGTCCATACGCAGAAGAAGAAAATGATGGAGGAGATGAAACAACAGAAGAGAGACGAAGAAGGTCTACACCTTCTGACCCTGCTACTTCAGTGTGCGGAGGCTGTTTCGTCGGACAATCTGGACGAAGCCAATAAGATGTTATTGGAGATCACTCAACTCTCCACCCCATACAGGACCTCCTCGCAGCGAGTGGCGGCCTACTTCTCGGAAGCTGTATCAGCGAGACTGGTGAGCTCGTGTTTGGGCATATATGCAGCTCTGTCTTCGTTGCCGCTCAGCTATACACAGAAAATGGGTTCAGCATTTCAAGTCTTCAATGGCATCAGTCCATTCGTGAAGTTCTCGCACTGCACTACAAATCAAGCCATATAG 1713 0.4839 MVRKRMASEMELHASPMAMNIMNSSNGGSAAASRFSRPNIMAGCSEIDQYVTGNHNHSSNSNNSNHLPPLATDHRHQGFLSIDNSRLSLNPSTGLCPTTNPTMTAPHNYSTSQLLACSTNLTTLTTSGVGSCGYYLSSSSSNSPNHFNHVNTEGLCGGEDLSLHPNLEAQKQSQFQSCRSQLTPAPAVCGFSGLPLFSSHRTSTTPDSTDLGGDGGTPPAVSLSSAGASCPTESTVAATDSSAGRANSGVSMEDGGASATAWIDEIIKDLIHSSTSVSIPQLIHNVREIIYPCNPNLAILLEYRLRSLCFSTASASTTAASSITNYPIEQNQKKRIEEHPLGAAMGLRHRSSHQQSFSNLHLPAAAPSQNILNQMHSNWNLTSGLGNEANSNPSMVSATQSALPPCPNQLVRPQQQSQEQQQDQEEDSQLPSTTIATPPSSEETETTVHTQKKKMMEEMKQQKRDEEGLHLLTLLLQCAEAVSSDNLDEANKMLLEITQLSTPYRTSSQRVAAYFSEAVSARLVSSCLGIYAALSSLPLSYTQKMGSAFQVFNGISPFVKFSHCTTNQAI* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00492 570 MobiDBLite consensus disorder prediction 222 248 - -
Pte5g00492 570 MobiDBLite consensus disorder prediction 383 445 - -
Pte5g00492 570 MobiDBLite consensus disorder prediction 383 461 - -
Pte5g00492 570 MobiDBLite consensus disorder prediction 200 253 - -
Pte5g00492 570 Pfam GRAS domain family 472 570 IPR005202 -
Pte5g00492 570 MobiDBLite consensus disorder prediction 446 461 - -
Pte5g00492 570 ProSiteProfiles GRAS family profile. 462 570 IPR005202 -
Pte5g00492 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 427 570 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00492 Pte-Chr5 5031156 5032868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00492 431 570 GRAS Transcription Factor Family AT3G54220 69.718 5.95e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g00492 GRAS 2.6e-24 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00492 - - qsa:O6P43_016422 319.316