Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00476 ATGACATCAGGTCGGGAAAATTTACAACGTTGGTTGACTGATCTTAAAGCTCGTGACCAATTTGTAATTCGTGCCACTTCAGATATTGAAATAATGTGGAATGATGCTAGGCAAATGAAGCCTGACCCTGTTTACAAGCGTCCTTTTTCGGCAGAACGTTTTGTGCAATGGTCCCCATTGGGCACATTTTTGGCAACAATTCATAGACAGGGAGCAGCTGCGTGGGGCGGTGCTACGGAGTTCAGTCGTCTGATGCGATTTGCCCATCCTCTGAGGGTGTCGATTGACGGATTTGGAATGAGAACTGGAAAAGTGATACGTGATTTCAATGCAAGTGCTGATGATATCGTAATTAGAGGCACTGGTGATGGTGTCACTGTGTCATGGCCTAGTTACATGCGGTCGAAATCAGCCTGCCCAGGTCTGTTTAAATCCAGGACCTGCAATGTACATAATCAATTCAAGGAATCCTTGAAGTTTGAAAATATAACGGATTTCAGTTGGTCTCCAACTGATACAATTCTTGCTCTTTTTGTTCCTGAATTAGGTGGTGTAAATCAAACTGCTCAGGTAAGTTTGGTTCAAATGCCCAGTAAAGAGGAAATCCGAAAGAAAAACCTTTTAGGTGTTGGTGCCTGCAAAATGTACTGGCAAAGCAATGGGGACTACCTTGCTCTCGCTGTCAAAGTTGATCGTTACACAGAAACAAAAAAAAGCACATACATAGCGTTTGAGTTATTCCGCATAAGAGAACTTGACATACCCATTGAGAAGGTATTGCTGGAGATATCAAAAAGAAGAAACTTGCTGGATGATTTCGTCCTTGAATGTCTATTAGATGAGTCATGGAAGGAGTTGGACATATCCAAGTCCAAGGTTACAGACTTTAGTCTGAATAAAGTAGCTGAGGTCTGCATCAATCTTGAAGCATTGGACATGAGAAGCTGTCCACAAAGCAGCCAAACAGCAAAAGATTGTTTGGTTTTGCTGAAGGAAGAAGAATTGTTTTTGCTGAAGGAAGAGGACGAGGTTGTGCCAGAATCGTGGGAAGACGTCCCTCTGGAATTGTTTAAGATGAACCTGCCGAAAATGATACTTTGGCAAGATATGGACCCAGATTCGCAGGAGTTTATCCGATACGAGATTCCTCATGTCAACATAATCTTCACCACCGACTACCGGGAGGCTTTGTTTCCCTCGGAAAGAAAAGGAAAACAATTGGGAAATAGAAGGGAAATAGAAGAAGAATGGTAA 1254 0.4258 MTSGRENLQRWLTDLKARDQFVIRATSDIEIMWNDARQMKPDPVYKRPFSAERFVQWSPLGTFLATIHRQGAAAWGGATEFSRLMRFAHPLRVSIDGFGMRTGKVIRDFNASADDIVIRGTGDGVTVSWPSYMRSKSACPGLFKSRTCNVHNQFKESLKFENITDFSWSPTDTILALFVPELGGVNQTAQVSLVQMPSKEEIRKKNLLGVGACKMYWQSNGDYLALAVKVDRYTETKKSTYIAFELFRIRELDIPIEKVLLEISKRRNLLDDFVLECLLDESWKELDISKSKVTDFSLNKVAEVCINLEALDMRSCPQSSQTAKDCLVLLKEEELFLLKEEDEVVPESWEDVPLELFKMNLPKMILWQDMDPDSQEFIRYEIPHVNIIFTTDYREALFPSERKGKQLGNRREIEEEW* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00476 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 100 262 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pte5g00476 417 SUPERFAMILY DPP6 N-terminal domain-like 35 227 - -
Pte5g00476 417 Pfam Eukaryotic translation initiation factor eIF2A 205 262 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00476 Pte-Chr5 4801242 4834396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00476 6 276 Eukaryotic Initiation Factors Gene Family AT5G27640 48.701 7.56e-93 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00476 K03253 - qsa:O6P43_015800 324.709