Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00473 ATGCGTACTGCCACGAATGCTAACCGAGTTTCTAAACTCATTACTCTAAAAGGAAAGAAGGCAAATGCTCTGTTTTGGTCACCTACTGGCCAGTGTATAGTGCTTGCTGGACTGAAGGGGTTAAATGGGCAGCTGGAGTTTTACAATATTGATGACCTTGAAACCATGTCAATATCTGTGCATTCTATGGCAGCAGATATGGAATGGGATCCCACTGGAAGGTATGTTGCAACTTCTGTCACTTCAGTTCATGAAATGGAAAATGGTTTCAATATTTGGTCATTCAACAGAAAGCTTCTTTACCGAATACTGAAAGATCATTTCTTCCAGTTCTTGTGGCGTCCCAGGCCACCTCCTTTGTTGAGTGCTGAGGAGGAGGAAGAGATTGCGAAGAACTTGAAGTACAGCAAGAAGTATGAGGCAGAAGTTGAGTGA 435 0.4299 MRTATNANRVSKLITLKGKKANALFWSPTGQCIVLAGLKGLNGQLEFYNIDDLETMSISVHSMAADMEWDPTGRYVATSVTSVHEMENGFNIWSFNRKLLYRILKDHFFQFLWRPRPPPLLSAEEEEEIAKNLKYSKKYEAEVE* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00473 144 SUPERFAMILY Putative isomerase YbhE 8 98 - -
Pte5g00473 144 Pfam Eukaryotic translation initiation factor eIF2A 9 111 IPR013979 -
Pte5g00473 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 5 142 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00473 Pte-Chr5 4730654 4731679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00473 1 142 Eukaryotic Initiation Factors Gene Family AT5G27640 76.224 4.37e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00473 K03253 - zju:107419937 226.483