Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00461 ATGTCGGATTTGAAGGTTGAAATGTCGAAGCAAACCTCAATTTTTGGTTTGAAGCTATGGGTTGTGATTGGTTTTTGTGTTGGTGCATTTATAGTCTTGATCATTTTTATCCTACCTGTGTGGGTCTCATGCAAGAGAAGGTCTAGGAGATCTCTTGACAAGTACCCCCTTTCCCAAATGCCAAATGTTTCCAAAGATATCAAGGTTGACAGGGTAGGTGTGAAGAGGGCCGATGATCACCCTGATGGTCTATTTATCCCTGTCCAGGATAAAGCAGGTGATAAGAATTCAGAGAAGCTTTTGGTCCATTTGGGAAGGAGCAAGTCCAATGATCATGATAGTGTTAGTCAGTGCAGTTCAGTTTATCATCATGAGAGAGTTGGTAGTTCATTTTCTGGGGAAGAAGGAAGCTCAGGTACCTGTCAAAAGCAGCGTTCGTTGTCATATGGCAGTCTGGTAACTGCTTCTCCTTTAATTGACTTGCCAGAAATTTCTCATCTTGGTTGGGGGCACTGGTTTACGCTTCGGGATCTAGAATTGGCCACAAACCGTTTTTCTGCAGAGTGTGTGCTTGGTGAGGGTGGATATGGAGTTGTTTATAGGGGTCGACTAGTTAATGGTAGTGTGGTGGCGGTGAAGAGACTTCTTAATAATATGGGACAAGCAGAGAAAGAATTTAGGGTGGAAGTGGAGGCCATTGGCCATGTTAGACATAAGAACCTTGTGCGGCTTCTTGGATATTGTATTGAAGGAGTTCACAGGCTGTTGGTATATGAATATGTAAGTAATGGAAATTTAGAACAATGGCTTCATGGGGCCATGGGTCAACATGGAATACTAACATGGGAGGCACGCATGAAAATCATTACTGGTACCGGAAAAGCGCTTGCTTACTTGCATGAAGCTATTGAACCAAAGGTTGTTCACCGGGATATCAAATCTAGCAACATTTTGATTGATGATGAGTTCAATGCCAAGGTTTCTGATTTTGGGTTGGCTAAACTTCTGGATTCTAGCGAAAGTCACATAACCACAAGAGTAATGGGAACATTTGGATATGTGGCTCCAGAATATGCTAACTCAGGTATGTTAAATGAGAAGAGTGATATATACAGCTTTGGTGTCCTCATGCTAGAGACAGTCACTGGAAGAGACCCTGTAGACTATGCACGTTCTGCTAATGAGGTCAATCTTGTGGAATGGCTAAAGACGATGGTGGGAGCAAGAAGAGTTGAGGAAGTTGTGGACCCAAACCTTGATGTTAAACCTGCAGCACGGGAATTAAAACGTGCCCTTCTGGTTGTGCTACGCTGTGTTGACCCTGATGCAGAGAAAAGACCCAGAATGAGTCAGGTTGTTAGGATGCTTGAAGCTGATGAATACCCCATTCGAGAGGATCGTAGGAATAGGAGGAGCCACACAACAAGCATGGACATTGAATGTATGAAGGACATTGCTGGTCCATCTGACGTAGAAAGCAAGATAGATGATTCGAGGAGCCATAAATCTGAAACAACAAATGCATAG 1527 0.4335 MSDLKVEMSKQTSIFGLKLWVVIGFCVGAFIVLIIFILPVWVSCKRRSRRSLDKYPLSQMPNVSKDIKVDRVGVKRADDHPDGLFIPVQDKAGDKNSEKLLVHLGRSKSNDHDSVSQCSSVYHHERVGSSFSGEEGSSGTCQKQRSLSYGSLVTASPLIDLPEISHLGWGHWFTLRDLELATNRFSAECVLGEGGYGVVYRGRLVNGSVVAVKRLLNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVSNGNLEQWLHGAMGQHGILTWEARMKIITGTGKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSSESHITTRVMGTFGYVAPEYANSGMLNEKSDIYSFGVLMLETVTGRDPVDYARSANEVNLVEWLKTMVGARRVEEVVDPNLDVKPAARELKRALLVVLRCVDPDAEKRPRMSQVVRMLEADEYPIREDRRNRRSHTTSMDIECMKDIAGPSDVESKIDDSRSHKSETTNA* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00461 508 ProSiteProfiles Protein kinase domain profile. 185 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00461 508 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Pte5g00461 508 CDD STKc_IRAK 191 457 - -
Pte5g00461 508 Gene3D Transferase(Phosphotransferase) domain 1 261 474 - -
Pte5g00461 508 SMART serkin_6 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00461 508 PANTHER OS01G0323000 PROTEIN 4 477 - -
Pte5g00461 508 MobiDBLite consensus disorder prediction 466 508 - -
Pte5g00461 508 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
Pte5g00461 508 FunFam Putative receptor-like protein kinase 167 260 - -
Pte5g00461 508 Pfam Protein kinase domain 189 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00461 508 Gene3D Phosphorylase Kinase; domain 1 165 260 - -
Pte5g00461 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Pte5g00461 508 MobiDBLite consensus disorder prediction 485 508 - -
Pte5g00461 508 SUPERFAMILY Protein kinase-like (PK-like) 169 459 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00461 Pte-Chr5 4575650 4579874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00461 16 459 Trihelix Transcription Factor Family AT1G70460 40.000 4.33e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte5g00461 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00461 - - tcc:18612176 797.349