Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00448 ATGGCTGCAATGAAGAGTGAGGCGAAATTTGTCAAAGCAATCAAGCCATCATCTTGCACACCTCTTCATCTACAGACCTACAAACTTCCCTTTCTAGACCAGAGAGCCCCGAACATATTTTTCAACAACAACTTCTTCTATCCTTACCTCAAAGGCAGTAGCTACGGTGACGATGGTGATAGTAATGGCCGAATTAGCAATTTCCAGCATGCATCCCTACTTCTCCAGAAATCACTGTCTCAGACACTCACATTATTTTACCCTTCTGCGGGCAGATTCCAAGATGATGCCACCATCATTTGCAATGACGAAGGAGTTGTCTTCATGGAGTCCGAAGCCAATTTTTCGCTATCTGATATCCTAACTTCTGCAGACTTGTCCATCATTGTCGACCATCTTCTCCCAACTAGATATCCAGAAGCCACTGCAAACTTCCACGGCTGCATGATACTAATCAATTTTGTACTGTTTACATGTGGTGGAACTGCCATATGTATCGAAAATACACATAAAACAGCAGACTGGACAACCTGGATGGAATTCCTCAAGAATTGGTGTGCATTGAGCAAAGGGTTTGAACAACCAATTAAGCCTGATTTGACCACATTAACAAACATCTTCCCTGCAACAGCGATCCCCAAGAAAATGGAGCACTCTGTCAATAAATACAACTCAATCATGAGAAGGTTTGTGTTTCGCGCCTCCAAAGTTCAGGAGCTCAAGTCTAAGCTACTCTTCGAGCTTAGGAAAGAAGGGTATGAAAATTACTACCCTTCTCGAGTGGATGCAGTGACGGTACTAATATGGAGATGTCTTATGACTTCGTCCAAATCCAAAACTGGGGTTTTCATGCCAACGATGATGCTTCAGGCTGCTGATCTCCGTAGGCGTATGGATCCACCATTGCCCCAGACTGTAACGGGGAACATGGCATGGCTGATGTCGATGGCATGTGAGAAGGAGAGCGAAACAGAACTGAGTGAGTTGCTGAAGAAGATAGTGGCCTTGAAGGGTTCATACGAAGAGTTGGGGAAAAAAATTAATGTGAAACAGCTGGATGAGATTATAAAGGAAGATGTTGAACAAAGAGGAGAGTTATTTAATAAATATAAGGGTCGATTGGGGCATTATGTCTGCACTGCTCTCTGCAAATTTGGACAGTATGAACTTGATTTTGCTGGAATGGGGAAACCGGTTTGGATGACTGGTCCTGCTCCTGAGATGTTTAAAAATTATATTAATTTGATGGATACAAGAGTAGAAGGTGAAGTTGAAGCTTTGGTGTATTTGGATGAAGAAGAGCTGAATGCATTTGCATGTAATGAGGAGTTGCTTCAGTTTGCTGTGGTTAATCCATCTGTTATATGA 1368 0.4262 MAAMKSEAKFVKAIKPSSCTPLHLQTYKLPFLDQRAPNIFFNNNFFYPYLKGSSYGDDGDSNGRISNFQHASLLLQKSLSQTLTLFYPSAGRFQDDATIICNDEGVVFMESEANFSLSDILTSADLSIIVDHLLPTRYPEATANFHGCMILINFVLFTCGGTAICIENTHKTADWTTWMEFLKNWCALSKGFEQPIKPDLTTLTNIFPATAIPKKMEHSVNKYNSIMRRFVFRASKVQELKSKLLFELRKEGYENYYPSRVDAVTVLIWRCLMTSSKSKTGVFMPTMMLQAADLRRRMDPPLPQTVTGNMAWLMSMACEKESETELSELLKKIVALKGSYEELGKKINVKQLDEIIKEDVEQRGELFNKYKGRLGHYVCTALCKFGQYELDFAGMGKPVWMTGPAPEMFKNYINLMDTRVEGEVEALVYLDEEELNAFACNEELLQFAVVNPSVI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00448 455 Pfam Transferase family 13 444 - -
Pte5g00448 455 Gene3D - 223 448 IPR023213 -
Pte5g00448 455 Gene3D - 7 217 IPR023213 -
Pte5g00448 455 PANTHER F21J9.9 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00448 Pte-Chr5 4435088 4437066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00448 74 438 Monolignol Biosynthesis Gene Families AT5G48930 21.883 2.28e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00448 - - qsa:O6P43_014533 357.836