Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00447 ATGGATCCAAAGCAGCAGCATGACCAAGAGAAAGGGTCTAAAACAAGGCCTAGTGTTGATTCAATGTTAACATCTCCTATGGTGGCTAAGATGGTTTCACCAGTTTCTTCAGCAGCTGAGGGAGATATAGTCAGGCGGCCGAGAGGCCGCCCTGCCGGCTCGAAGAACAAACCGAAGCCGCCGATCATTGTCACAAGGGACAGTGCCAATGCATTGAGGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGTGTGAGAGTTTAGCAAGCTTTGCCAGGAGAAAACAACGTGGAATTTGCATACTCAGTGGAAGTGGATGTGTAACCAATGTAACACTGCGGCAACCGGCTTCTTCTGGATCGATTGTGACACTGCATGGCAGGTTTGAAATTGTGTCATTGCTAGGATCCATCTTACCCCCACCCGCACCAGCTGGGATCACTGGTCTTACGATATACTTGGCAGGTGGTCAAGGGCAGGTTGTGGGTGGGGTTGTAGTAGGTGCTTTGATTGCTTCAGGTCCTGTTGTGATCATGGCTGCATCATTCATGAATGCCACTTTCGATCGTATTCCATTAAATGAAGACGAAATCGTAGCCGCGATGCAGAATCAGCATTACCAAAATGGCCGCAACCATCATCTTGATCTCTCTGATTTGTATGGAATGCCACAGAATTTGCTCACCCATGGTGCAGCTATGCCTCCTGAGACATACACTTGGGCACCTGGCCGAAACATGTCAAAAGCTTAA 756 0.4894 MDPKQQHDQEKGSKTRPSVDSMLTSPMVAKMVSPVSSAAEGDIVRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVCESLASFARRKQRGICILSGSGCVTNVTLRQPASSGSIVTLHGRFEIVSLLGSILPPPAPAGITGLTIYLAGGQGQVVGGVVVGALIASGPVVIMAASFMNATFDRIPLNEDEIVAAMQNQHYQNGRNHHLDLSDLYGMPQNLLTHGAAMPPETYTWAPGRNMSKA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00447 251 PIRSF ESCAROLA 1 248 IPR014476 GO:0003680
Pte5g00447 251 MobiDBLite consensus disorder prediction 1 15 - -
Pte5g00447 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 212 IPR014476 GO:0003680
Pte5g00447 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 201 - -
Pte5g00447 251 CDD DUF296 73 156 IPR005175 -
Pte5g00447 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 185 IPR005175 -
Pte5g00447 251 Gene3D - 72 209 - -
Pte5g00447 251 MobiDBLite consensus disorder prediction 1 62 - -
Pte5g00447 251 FunFam AT-hook motif nuclear-localized protein 72 213 - -
Pte5g00447 251 ProSiteProfiles PPC domain profile profile. 69 206 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00447 Pte-Chr5 4420649 4421404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00447 30 250 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.094 7.64e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00447 - - cave:132182813 404.831