Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00443 ATGCAGCAGGAGCATAGGAAAAAGAATTCTGCAGAAATGGAATTTTTCTCTGAATATGGTGATGTGAATCGTTACCAAATTCATGAAGTCATTGGCAAAGGAAGTTATGGTGTTGTGTGCTCAGCAATTGACACTTATACAGGTGAAAAGGTTGCAATAAAAAAGATACATGACATCTTTGAACACACATCTGATGCTGCACGTATACTCCGTGAGATAAAGCTGCTCAGGCTGTTACATCATCCCGATATAGTTGAAATTAAACACATTATGCTACCTCCTTCTAGATGGGAGTTCAAAGATATTTATATAGTGTTTGAGCTCATGGAATCTGATCTGCATCAAGTCATTAAAGCCAATGATGATTTAACCAAAGAGCATTATCAATTTTTTCTTTACCAGCTGCTTCGAGCCTTGAAGTATATTCACAGTGCAAATGTCTTTCATCGGGATTTGAAGCCGAAGAACATATTGGCAAATGCAAATTGTAAACTCAAAATCTGTGATTTTGGGTTAGCAAGGGTTGCTTTTAATAACACACCAACAACTATACTTTGGACGGATTACGTTGCTACAAGGTGGTATAGGGCTCCTGAGCTTTGTGGATCTTTTTTCTCTAAGTACACACCTGCAATTGATATGTGGAGTATTGGATGTATCTTCGCTGAAATATTAACCGGGAAACCACTTTTCCCTGGGAAAAATGTTGCTCATCAATTAGATCTGATGACTGATCTGCTTGGCACTCCATCTCTTGACACCATTTCACAGGTACGTAATGAGAAAGCAAGGAAATACTTAACCACAATGAGAAAAAAGCAGCGAGTTCCATTTTCAAAAAAATTTCCAAATGCAGATCCTCTGGCTCTACGGCTATTGGAAAAGTTGCTTGCCTTTAACCCAAAGGACCGCCCCACAGCTGAAGAGGCCCTAGCTGATCCCTACTTCGCAGACCTAGCAAAAGTGGAAAGGGAACCTTCTTGCCAACCAATTTCAAAATTTGAATTTGAATTTGAGTGGAGGTCTTTTACGAAGGAAGACATACGGGAGCTTATTTTTCGTGAGATACTTGAGTATCATCCACAGATACTGAAAGATTACAAGAAAGGAGCTGAGAGAACTAATTTTGTTTATCCAAGTGCTGTTGATCAATTCCGCAAGCAATTTGCACATCTGGAGCAGAATGGTAAAGATGGCCAAGCTATACCCTTTGAAAGAAAGCATGCCTCTCTTCCCAGGTCCACTATTATGCCGTCAAATGTAATTCCTCCCAGAAACCAACCAACTATTGCTTCAAACCGAGATCGACAAGCTGTAGAGCACTGTGGCCTTAATCCCAGGGACAAAGAAGTGATTCCTGTGAGCATGTCAAGGTCCATTCAGGGACCAGCTGCAGTACCTTTAGCACAAGCTGTAAATATTGTCGGGCCGGTTGTTCCACAAGAAAAGGCGATTTTTATAAAAGATGCCTATGATCCAAGAACGGTGATAAAAGGCACTAGTCTCCCAATCCCATCTCAAGGGTATTGCCACAGACCCTTGACAAGAGGCTCCAGTCTTCCATCTCAAGGATACTATTGCTATTACTCTTACAGATCTGATGTCGCCAACCAACAGACTTCTGCAGCAGAATCTAATAGGAGTCACCTACCGCAAGGTAGATACATCCCTTTTCCTCAATATGGGATGAATGCCAAAGCAGCCCCAGAAGTAGCTATCAACATTGATACAAACCCCATTTTCATGACACGTGCTGGAGTGAACAATATAGAAGACGATGGTCGTGTGGCTATTGACACGAACTTTCTATTGGCAAAGGCTCAATATGGTGGAACCAACGCTGCAAGTGGTGCAATCGCAGCGGCTTCCACTGCTGGCCATAGAAAGGTTGGAAGTGTCCAGTTTGGAATGTACAAGATGTACTAG 1926 0.4185 MQQEHRKKNSAEMEFFSEYGDVNRYQIHEVIGKGSYGVVCSAIDTYTGEKVAIKKIHDIFEHTSDAARILREIKLLRLLHHPDIVEIKHIMLPPSRWEFKDIYIVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANANCKLKICDFGLARVAFNNTPTTILWTDYVATRWYRAPELCGSFFSKYTPAIDMWSIGCIFAEILTGKPLFPGKNVAHQLDLMTDLLGTPSLDTISQVRNEKARKYLTTMRKKQRVPFSKKFPNADPLALRLLEKLLAFNPKDRPTAEEALADPYFADLAKVEREPSCQPISKFEFEFEWRSFTKEDIRELIFREILEYHPQILKDYKKGAERTNFVYPSAVDQFRKQFAHLEQNGKDGQAIPFERKHASLPRSTIMPSNVIPPRNQPTIASNRDRQAVEHCGLNPRDKEVIPVSMSRSIQGPAAVPLAQAVNIVGPVVPQEKAIFIKDAYDPRTVIKGTSLPIPSQGYCHRPLTRGSSLPSQGYYCYYSYRSDVANQQTSAAESNRSHLPQGRYIPFPQYGMNAKAAPEVAINIDTNPIFMTRAGVNNIEDDGRVAIDTNFLLAKAQYGGTNAASGAIAAASTAGHRKVGSVQFGMYKMY* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00443 641 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte5g00443 641 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 341 - -
Pte5g00443 641 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pte5g00443 641 FunFam Mitogen-activated protein kinase 14 118 - -
Pte5g00443 641 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pte5g00443 641 CDD STKc_TDY_MAPK 24 361 - -
Pte5g00443 641 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pte5g00443 641 SUPERFAMILY Protein kinase-like (PK-like) 21 321 IPR011009 -
Pte5g00443 641 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00443 641 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00443 641 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00443 641 FunFam Mitogen-activated protein kinase 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00443 Pte-Chr5 4375011 4381521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00443 1 476 MAP Kinase Gene Family AT2G42880 77.358 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte5g00443 Pkinase 5.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00443 - - qsa:O6P43_021087 915.22