Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00440 ATGGCTTTTAACTTTGTTATTTTCTCTGTGCTCTTCTCTGTACCTGTCATGATATTTCTAAGTTTCTTGAACCGCAAGAAAAACTATGGAAAAACCAGAAAACCATTACCACCTGGAGAAATGGGATTCCCATGGATTGGTGAAACCATGGAGTTCTTCCATGCTCAACGCAAAAATCAGTTATTTGAGGAGTTTGTTCATCCTCGAATTCTTAAACACGGTCGCATCTTCAAGACAAGTCTTCTGGGTACTCCAACCGTGGTCGTAAGTGGAGCTGAAGCAAACAAGTTCTTCCTATCCAATGAGTTCAAGCTGGTCAAGAGTTCCTGGCCTGCTGCAGCAGTTCAGCTCATGGGGAAGGACTCGATCATGGAGACAGAAGGAGAACGCCATCGTTTTATCCGAAGCTTACTGGGAATCGGCCTCGGTTATGCAGGGGTCGAAGCACTCGTGCCCAAAATCTGCCAATCTGTACAGAACCACTTAGCTACAGAGTGGCAAGGTAGACAAGAAGTTGGGCTTTACCGTTCGACAAAATTGTTGACATTCAGAATTGTGTGCGAGTGCTTGTTTGGCATCCACATAGAGCCAACGACTTTAGCCACCTTTGAGAGAGTACTGGAAGGAGTGTTCTCCGCACCTGTTACGTTTCCTGGCTCCAAATTCTACAGAGCAAAGAAAGCCAGACTCGAGATACAGAAAATGCTGACAGCGGTTGTGAGAGACATGAGGAATCAAATGGAGAGATCATCTGACGGCAAAGGGGACAATGGCATGTTGCTGTCTAAGTTGGTAGCTGCACTTATCCGTGGGGAGATTACAGAGAAGGAGGTCGTAGACAATGTGGTCTTGCTAGTTTTTGCAGCTCATGACACAACCTCTTTCGCCATTGTCATGACATTCAAGATGATGGCTCAGCATTCTGACTGCTACAGTACACTTCTTCAAGAACATATGGACATTATGAGCAACAAAAGATCGGGTGAGACTCTGACATTGGAAGACATAAAGAAGATGAAATATACGTGGCAAGTTGCTAGAGAAAGCATGCGGCTATTTCCTCCAATCTTTGGCTCCTTCAGGAAAGCAATTACTGACATTGAATATGAAGGATTCGCCATCCCCAAAGGATGGAAGGTGTTATGGACTGCACATGGGACGCATTACAGTGAGGAGTATTTCAAGGACCCTCTTAGTTTCAATCCAAGTAGATTTGAGAAACCAATGTCTCCATATGTGTATGTTCCTTTTGGGGGAGGGCCAAGGGTTTGTGCAGGCTCCCAACTCACCAAGCTCAACATTCTTATCTTTCTGCATTATGTTGTGACAAAGTTTGATTGGTCATTGCTACGTCCTGACGAGGGAATCACCATGGATCCCCTTCCTTTCCCTTCAAAAGGGATGCCCATCAAAGTATCCCCCAAATTCTCCTAA 1434 0.4505 MAFNFVIFSVLFSVPVMIFLSFLNRKKNYGKTRKPLPPGEMGFPWIGETMEFFHAQRKNQLFEEFVHPRILKHGRIFKTSLLGTPTVVVSGAEANKFFLSNEFKLVKSSWPAAAVQLMGKDSIMETEGERHRFIRSLLGIGLGYAGVEALVPKICQSVQNHLATEWQGRQEVGLYRSTKLLTFRIVCECLFGIHIEPTTLATFERVLEGVFSAPVTFPGSKFYRAKKARLEIQKMLTAVVRDMRNQMERSSDGKGDNGMLLSKLVAALIRGEITEKEVVDNVVLLVFAAHDTTSFAIVMTFKMMAQHSDCYSTLLQEHMDIMSNKRSGETLTLEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFAIPKGWKVLWTAHGTHYSEEYFKDPLSFNPSRFEKPMSPYVYVPFGGGPRVCAGSQLTKLNILIFLHYVVTKFDWSLLRPDEGITMDPLPFPSKGMPIKVSPKFS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00440 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Pte5g00440 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 Gene3D Cytochrome P450 26 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 PANTHER CYTOCHROME P450 26 34 463 - -
Pte5g00440 477 CDD CYP90-like 69 474 - -
Pte5g00440 477 FunFam Taxadiene 5-alpha hydroxylase 26 475 - -
Pte5g00440 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte5g00440 477 Pfam Cytochrome P450 37 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00440 Pte-Chr5 4338441 4340108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00440 4 380 Cytochrome P450 AT2G42850 58.333 2.22e-153 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00440 - - qlo:115955311 704.131