Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00421 ATGTTTCCTTGTATTATTGCCAGAACCTCTACAACTGATGTGATATCTAGTGGAATGGGTGGAACAAGAAATGGTGCACTTCAACTGATGCAAGCTGAACTTCAAGTCCTTTCTCCTTTGGTTCCTGTTCGCGAGGTCAATTTCCTAAGGTTCTGCAAGCAACACGCAGAGGGTGTATGGGCTGTTGTAGATGTGTCTATTGACACCATCCGGGAAACTTCTTCTGGTGCACTGACATATCTGAACTGCAGGAGGCTTCCTTCTGGCTGTGTTGACACTGCAGGGCGAAGTCAAAATCTGGTGGGTTGA 309 0.466 MFPCIIARTSTTDVISSGMGGTRNGALQLMQAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSSGALTYLNCRRLPSGCVDTAGRSQNLVG* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00421 102 ProSiteProfiles START domain profile. 1 91 IPR002913 GO:0008289
Pte5g00421 102 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 91 IPR042160 -
Pte5g00421 102 Pfam START domain 7 91 IPR002913 GO:0008289
Pte5g00421 102 SUPERFAMILY Bet v1-like 21 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00421 Pte-Chr5 4151445 4151846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00421 1 91 Homeobox Transcription Factor Family AT4G00730 79.121 3.54e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00421 K09338 - sind:105173189 172.555