Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00420 ATGGCTGACATTCAGTTGAAAAAACCAGGCCGCGTTGAGAGAACACATGATCAGTCGAAAAAACCAGGCCACGTTGAGAGAACACATGATCAGTCGAGAAAACCAGGCCACGTTGAGAGAACACATGATCAGTCGAGAAAACCCGGACCTGTTGAAAAACCAAATGATCAGTCGAAAAAACCTGGCCATGTTGCTCTTCACATAGGCATAATAGATCATCCAACGCCAAAAACGGAACACATTGTGAATTGCGGTTGTGTCACCCATGGCTCCACTGCAGCACAGTGCTACAAAGATTACTCGAAGAGAGGCCATTGGCTTCGTGCTGCAGTGTTAGGAGCAAACGAGGCAGTGGTTCATATCTCATCCATTTTGATGGGAGTGGATGCAGTGAATACTGACCCCAAAACCATATTTATTGCTGGATTTGCTGCTTTGGTTGCAGGAACATTTGGTTTAGCCATTGTGGAGTTTGTGACTATTGGCTGTCGCAGCACTGGTTTTGCTCGGTCTTCTAGGTGCAAGGCTTGGCAGGAGTCCATATTTGAGGTCTTGTTTGAGAGTTTTGGTTGGAGGGTTAATGGTTATGGGGATCACTTTGGGGATTACTAA 612 0.4608 MADIQLKKPGRVERTHDQSKKPGHVERTHDQSRKPGHVERTHDQSRKPGPVEKPNDQSKKPGHVALHIGIIDHPTPKTEHIVNCGCVTHGSTAAQCYKDYSKRGHWLRAAVLGANEAVVHISSILMGVDAVNTDPKTIFIAGFAALVAGTFGLAIVEFVTIGCRSTGFARSSRCKAWQESIFEVLFESFGWRVNGYGDHFGDY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00420 203 MobiDBLite consensus disorder prediction 1 61 - -
Pte5g00420 203 MobiDBLite consensus disorder prediction 1 60 - -
Pte5g00420 203 Pfam VIT family 107 161 IPR008217 GO:0005384|GO:0030026
Pte5g00420 203 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 34 164 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00420 Pte-Chr5 4122174 4123638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00420 99 161 Nodulin-like Gene Family AT1G21140 57.143 3.80e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00420 K22736 - aew:130779733 81.6481