Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00415 ATGGTTGAATTGGACATTTCGATTCCCACTGCTTTTGATCCATTTTCTGAGGCTAAAGACTCGAATGCCCCCGGAACAAAGGATTATGTTCATATACGTATCCAACAGAGGAATGGAAGGAAGTGTCTGACTACTGTACAAGGGCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAGGATTTGAAGAAGGAATTTTGCTGCAACGGGAATGTTGTGCAGGACAAGGAGTTAGGGAAGATTATACAACTCCAAGGTGATCAACGCAAGAACGTTTCTCAGTTTCTTGTTCAGGCTGGCCTTACTCCAAAGGATCAGATCAAGATGCATGGTTTTTGA 339 0.4307 MVELDISIPTAFDPFSEAKDSNAPGTKDYVHIRIQQRNGRKCLTTVQGLKKDFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLTPKDQIKMHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00415 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 5 112 - -
Pte5g00415 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Pte5g00415 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Pte5g00415 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Pte5g00415 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Pte5g00415 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Pte5g00415 112 Gene3D - 2 112 - -
Pte5g00415 112 SUPERFAMILY eIF1-like 5 112 IPR036877 GO:0003743|GO:0006413
Pte5g00415 112 Pfam Translation initiation factor SUI1 27 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00415 Pte-Chr5 4092313 4095217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00415 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 81.416 2.78e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00415 K03113 - csv:101202908 208.764