Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00414 ATGGGTAGTTGTTTTAGTAGAAGTGAGAAGTTGAAGACTGAATATCATGGTTACAGATCAGGTGCTGGCTATGGAGTGGATTATCAGAAACCTCGTCAACGTGGAGTACATCAATCTCATGCTTCAGTTCAGCAATCCAACCAGACAACTCAGCAACATGCTGTGCCTACACAGGCAGCTACAGTGAAACCCCCTGTTTCAATACCGATTCAGTCAGACACCATTCTTGGCAAAAGATATGAAGATGTTAAACAGTACTATACCCTGGGAAAAGAATTGGGAAGAGGTCAATTTGGGGTGACATACCTTTGTACTGAGAATTCAACTGGAATGAAATATGCTTGCAAGTCTATTTCAAAGAGAAAGCTTATCACTAAGAGTGATAAGGATGATATAAGAAGAGAGATTCATATTATGCAACATATGAGTGGGCAGCCTAACATTGTGGAGTTCAGAGGTGCTTATGAAGATAAGCAATCAGTTCATCTTGTAATGGAGTTATGTGTAGGAGGTGAGCTCTTCGACCGGATTATTGCTAAAGGGCATTACAGTGAAAGAGCAGCTGCTTCAATAATCAGGCAGATTGTCAATGTTGTTAATATCTGTCACTTTATGGGTGTGATGCATAGAGATCTCAAGCCTGAGAATTTCCTATTGTCCAGCAAAGATGAGCGTGCTCTTCTGAAGGCAATAGATTTTGGGCTGTCTGTTTTCATTGAAGAAGGAAAAGTCTACCGAGACATAGTTGGAAGTGCATACTATGTTGCTCCAGAAGTTTTAAGGCGAAAATATGGGAAAGAAATAGATATATGGAGTGCTGGAGTTATTCTCTATATTTTACTGAGTGGAGTACCTCCATTTTGGGCTGAAACCGAAAAAGGAATTTTTGATGCCATATTAGAAGGATCCATTGATTTTGAAAGCAAACCTTGGCCATCCATTTCTAGCAGTGCCAAGGATCTTATCCGGAAAATGCTCACACTTGACCCAAATAAACGAATAACTGCTGCTCAAGTTCTAGAGCACCCATGGCTAAGAGAGGGTGGAAATGCATCAGACAAGCCCATTGACAGCGCTGTCTTATCTAGAATGAAGCAATTCAGAGTAATGAATAAACTCAAGAAGCTTGCCTTAAAGGTTATTGCAGAAAACCTTTCCAAAGAAGAGATTCAAGGGATAAAGGCTACGTTTGCCAACATTGACACTGATAACAGTGGTACTATCACATATGAAGAACTCAAGGCCGGGTTGGCGCGGCTTGGCTCAAAGCTTACAGAGACCGAGGTCAAACAGCTTATGGAAGCAGTAAGATACTACTACTTGCATAAGTTAGAACACTGTTGA 1344 0.4092 MGSCFSRSEKLKTEYHGYRSGAGYGVDYQKPRQRGVHQSHASVQQSNQTTQQHAVPTQAATVKPPVSIPIQSDTILGKRYEDVKQYYTLGKELGRGQFGVTYLCTENSTGMKYACKSISKRKLITKSDKDDIRREIHIMQHMSGQPNIVEFRGAYEDKQSVHLVMELCVGGELFDRIIAKGHYSERAAASIIRQIVNVVNICHFMGVMHRDLKPENFLLSSKDERALLKAIDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRKYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGSIDFESKPWPSISSSAKDLIRKMLTLDPNKRITAAQVLEHPWLREGGNASDKPIDSAVLSRMKQFRVMNKLKKLALKVIAENLSKEEIQGIKATFANIDTDNSGTITYEELKAGLARLGSKLTETEVKQLMEAVRYYYLHKLEHC* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00414 447 Gene3D Transferase(Phosphotransferase) domain 1 173 352 - -
Pte5g00414 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pte5g00414 447 SMART efh_1 392 420 IPR002048 GO:0005509
Pte5g00414 447 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00414 447 SUPERFAMILY EF-hand 371 436 IPR011992 -
Pte5g00414 447 FunFam Calcium-dependent protein kinase 1 89 172 - -
Pte5g00414 447 MobiDBLite consensus disorder prediction 35 63 - -
Pte5g00414 447 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Pte5g00414 447 Gene3D - 353 438 - -
Pte5g00414 447 FunFam calcium-dependent protein kinase 1 173 352 - -
Pte5g00414 447 CDD STKc_CAMK 87 344 - -
Pte5g00414 447 PANTHER SERINE/THREONINE-PROTEIN KINASE 79 434 - -
Pte5g00414 447 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Pte5g00414 447 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Pte5g00414 447 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00414 447 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00414 447 Gene3D Phosphorylase Kinase; domain 1 89 172 - -
Pte5g00414 447 CDD EFh 393 436 IPR002048 GO:0005509
Pte5g00414 447 SUPERFAMILY Protein kinase-like (PK-like) 86 353 IPR011009 -
Pte5g00414 447 MobiDBLite consensus disorder prediction 26 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00414 Pte-Chr5 4092188 4098958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00414 1 436 EF-hand Containing Proteins AT3G20410 71.895 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte5g00414 Pkinase 6e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00414 K13412 - qsu:111998297 689.493