Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00393 ATGGGTTACAACCAGAGGCAATTGGTTCTTTTGGGCGCCTCCAAAGACCTGGGTGACAATATTGGCCTCCTGGCAGAAAATTTGGTTGACTTGGATCAGAAGACAATCTCATTGTTTGCAGTCACATTACTCATCCTGTTACTGCTTCCCATTATCGTTCCCATCACTTTGTTTTTTGTCCCGGAACCAAGTCCAACGACGGCAGAGGAAAAAACTCCCTTTCTTGATTCAGCGCCAGAATCACTTAAGCAAGTAGATGATAATGGTGTCGACCACGTGGATTGTAAGAAGGATGGGACTACTACTCTTTCAGAACCAGTAGGTGCTAAGGAAGTTGTTTGCTTTGAAGAGAGAGTAATCCAAGGAGTATCGAAGGCAAGGGTACTAAAGCAGAGAGAAGGTCCGAATTTGGGAGAGGATTTTACCTTCGTGCAGGCATTGATGACTGTTGATCTTTGGCTAGTTTTCTTCTCACTCGTTCTGGGTGCTGGTTCTGGTTTGACAATAATTAATAACTTGGGTCAGATTTGCCAATCACTGGGGTACAATAATCTAAACATATTCGTGTCCATGATGTGCATATGCAACTTCCTAGGACGTGTTGGTGGTGGCTACTTGTCAGAGATAATAATGGCAATTGGTCTATTGTACTATGCCAAGGGATGGTCAGGCCAAGTGTACGTAGTCACCATCCTGACAGGGCTAGGATATGGAGCTCATTGGGCGATTGGGGTATCTTCCATTTCAGAGCTATTTGGCTTGAAGAGTTTTGGCGCTTTGTACAATTTCCTAAATATGAGTATGCCTGCTGGAACTCTCTTTCTCTCTGGCCTTATTGCCAGCAATATATACGATTATTTTGCTGAGAAACAAGCTGAACATCGTTTCCATAGTGACAGCAATGCAATGACTCCCTCTGACGATCCTAAAGTCCTTACATGTGAAGGCAACCTATGCTTTTCAATAACGTGTGCAATCTTATCAGGATCTTGTTTACTGGCAAGTATTCTCAGATTAGCTGTTGTTTGTCGAACTAAAGGATTATATTCCAAACTACGTGAAAAATCTAGTGCATTGAATTGA 1083 0.4275 MGYNQRQLVLLGASKDLGDNIGLLAENLVDLDQKTISLFAVTLLILLLLPIIVPITLFFVPEPSPTTAEEKTPFLDSAPESLKQVDDNGVDHVDCKKDGTTTLSEPVGAKEVVCFEERVIQGVSKARVLKQREGPNLGEDFTFVQALMTVDLWLVFFSLVLGAGSGLTIINNLGQICQSLGYNNLNIFVSMMCICNFLGRVGGGYLSEIIMAIGLLYYAKGWSGQVYVVTILTGLGYGAHWAIGVSSISELFGLKSFGALYNFLNMSMPAGTLFLSGLIASNIYDYFAEKQAEHRFHSDSNAMTPSDDPKVLTCEGNLCFSITCAILSGSCLLASILRLAVVCRTKGLYSKLREKSSALN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00393 360 SUPERFAMILY MFS general substrate transporter 41 347 IPR036259 -
Pte5g00393 360 Gene3D MFS general substrate transporter like domains 21 292 IPR036259 -
Pte5g00393 360 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 37 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00393 Pte-Chr5 3977669 3979673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00393 23 357 Nodulin-like Gene Family AT5G50630 40.510 2.47e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00393 - - tcc:18605115 317.005