Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00389 ATGGAAGAAGCTGAGAATCAGAAGGAACTCCAATTTCTTCAACAGTATTCCGTACCATCCACTTCACACAACAACGTGTCATCCTCTCGACCACCCGGTTCTGCTTCCAAGTTTCGTTTCCTTTCCACCCTCATGTCTGATCAGAAAACTCCTTCCCTTGATCTGCAACTGTCCATTAGTCTGAGGCCAATAAGATCCGTTTCATCGGATTGTGGTTACGACGATGAAACGACTCAGACGAGGTGCATAGAGGCGTTGAAGTGGCAGGCGGCAGAGCAAATTCGGTTGGCGACCATGGAGAAGGCTTATGCAGAGAGACTGAGAGAGCTGACGAGGAGGGAGATGGAGTTGGCGCAGTCAGAGTTCTCACGAGCTCGGCACATGTGGGAGAGAGCTCGCGAAGAGGTGGAGAAAGCTGAGAGAATGAAGGATAGGGCTACTAGGCAGGTTGACTCTACGTGCATGGTGATTACCTGCCAGTCTTGCCGGCAAAGGTTCAAGCCATAA 507 0.5069 MEEAENQKELQFLQQYSVPSTSHNNVSSSRPPGSASKFRFLSTLMSDQKTPSLDLQLSISLRPIRSVSSDCGYDDETTQTRCIEALKWQAAEQIRLATMEKAYAERLRELTRREMELAQSEFSRARHMWERAREEVEKAERMKDRATRQVDSTCMVITCQSCRQRFKP* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00389 168 PANTHER OS03G0310200 PROTEIN 40 168 - -
Pte5g00389 168 MobiDBLite consensus disorder prediction 1 34 - -
Pte5g00389 168 Coils Coil 129 149 - -
Pte5g00389 168 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00389 Pte-Chr5 3951449 3952485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00389 90 167 C2H2 Transcription Factor Family AT2G01940 37.975 1.57e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00389 - - cave:132176040 198.364