Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00377 ATGGCGTCTTCTTCTGATTCATGGATGAGAGAATACAATGAAGCTCTGAAACTTTCTGAGGATACATCTAGCATGATCTCTGAAAGGAGTTCCGTAGCTGCATCAGGGCCAGAAGCTCAGCGTCATGCTTCTGCTATAAGAAGGAAAATCACAATATTGGGGACTAGATTAGACAGCTTGGAGTCCCTTTTATCCAAGCTTCCTGGTAAACAACCAATTTCAGAAAAAGAGATGAATCGTCGCAAGGAAAACATTGCGAATTTGAGATCAAAAGTTAACCAGATGGCTTCCACTTTGAATATGTCAAACTTTGCCAACAGGGATAGTTTGTTTGGGCCAGAGACAAAAGCTCCTGATGCAATGACCAGAACTGTGGGCTTGGACAACCAAGGGCTTGTTGGATTTCAACGGCAAATTATGAGAGAGCAAGATGAGGGTCTTGAGAAATTAGAGGAGACTGTTGTAAGTACAAAACATATTGCGCTGGCAGTGCATGAAGAACTGGACCTACACACAAGGCTCATTGATGACTTGGATCAACATGTTGATCTTACGGACTCTCGACTCGGGAGGGTTCAGAAGAACTTGGCAATGTTGAACAAACGCACCAAGGGTGGTTGCACATGCTGTCGCATGATGTTATCTGTTGTTGGTATAGCTGCTCTTGCGGGTGTCGCTTGGCTATTGATCAAATACTTATAA 702 0.4359 MASSSDSWMREYNEALKLSEDTSSMISERSSVAASGPEAQRHASAIRRKITILGTRLDSLESLLSKLPGKQPISEKEMNRRKENIANLRSKVNQMASTLNMSNFANRDSLFGPETKAPDAMTRTVGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVHEELDLHTRLIDDLDQHVDLTDSRLGRVQKNLAMLNKRTKGGCTCCRMMLSVVGIAALAGVAWLLIKYL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00377 233 SMART tSNARE_6 132 199 IPR000727 -
Pte5g00377 233 SUPERFAMILY SNARE fusion complex 128 199 - -
Pte5g00377 233 MobiDBLite consensus disorder prediction 19 34 - -
Pte5g00377 233 CDD SNARE_Qc 140 197 - -
Pte5g00377 233 PANTHER SYNTAXIN 34 217 IPR045242 -
Pte5g00377 233 Gene3D - 139 201 - -
Pte5g00377 233 SUPERFAMILY t-snare proteins 29 100 IPR010989 GO:0016020|GO:0016192
Pte5g00377 233 MobiDBLite consensus disorder prediction 19 43 - -
Pte5g00377 233 FunFam syntaxin-51 isoform X2 139 201 - -
Pte5g00377 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00377 Pte-Chr5 3478626 3481529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00377 1 234 SNARE and Associated Proteins AT1G79590 73.504 4.66e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00377 K08503 - cit:102608030 382.489