Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00359 ATGGTGCCGAATATGGAGCCTGATTCGTCTGACAAAGACTCTGAACCGTTCATTGAGCTTGACCCGACTGGCCGGTATGGCCGCTACGATGAGCTTCTGGGATGTGGTGCAGTGAAGAAAGTATACCGTGCATTTGATCAGGAGGAAGGCATAGAGGTGGCATGGAACCAAGTGAAGCTCAAGCACTTCACGCATGACCCAGCAATGGTGGACAGGCTTTACTCTGAAGTCAGGCTGCTTAGGACCTTGACAAACAAGAACATCATTGCTCTTTACCATGTTTGGAGAGATGAGGAGCGCAACACTTTGAATTTCATCACTGAGGTCTGCACCAGTGGGGATTTGAGAGAGTACAGGAAGAAGCATAAGCATGTTTCCATGAAAGCCTTGAAGAAATGGTCTCTGCAGATTTTGAGAGGGTTGCATTATCTGCATACTCATGAGCCCTGCATCATTCATAGGGATCTCAATTGCAGCAATGTCTTTGTCAACGGCAACACTGGCCAGGTGAAGATTGGTGATTTTGGTTTGGCAGCAATAGTGGGAAAGAATCATTCTGCACATTCAGTACTAGGGACACCAGAATTTATGGCTCCTGAGCTGTATGATGAGAACTACACAGAAATGGTGGACATATATTCATTTGGTATGTGTGTGTTGGAGATGGTTACAACTGAAATTCCTTACAGTGAATGTGACAATGTTGCCAAAATTTACAAGAAGGTCTTATCTGGGGTGAGGCCGCAAGCACTCAGTAAAGTGAAGGACTTAGAAGTGAAAGCATTCATTGAGAGATGCCTTGCTCAGCCAAGGGCAAGACCTTCTACTGCGGAGCTTCTCAATGATCCATTCTTTGATGACGTTGATGATGACGAAAATTATGAATGTGCCTGTTCATGA 900 0.4522 MVPNMEPDSSDKDSEPFIELDPTGRYGRYDELLGCGAVKKVYRAFDQEEGIEVAWNQVKLKHFTHDPAMVDRLYSEVRLLRTLTNKNIIALYHVWRDEERNTLNFITEVCTSGDLREYRKKHKHVSMKALKKWSLQILRGLHYLHTHEPCIIHRDLNCSNVFVNGNTGQVKIGDFGLAAIVGKNHSAHSVLGTPEFMAPELYDENYTEMVDIYSFGMCVLEMVTTEIPYSECDNVAKIYKKVLSGVRPQALSKVKDLEVKAFIERCLAQPRARPSTAELLNDPFFDDVDDDENYECACS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00359 299 SUPERFAMILY Protein kinase-like (PK-like) 20 291 IPR011009 -
Pte5g00359 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00359 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 287 - -
Pte5g00359 299 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Pte5g00359 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00359 299 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Pte5g00359 299 CDD STKc_WNK 25 281 - -
Pte5g00359 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Pte5g00359 299 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00359 Pte-Chr5 3300132 3302332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00359 11 288 MAP Kinase Kinase Kinase AT5G55560 80.576 6.47e-176 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte5g00359 Pkinase 6.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00359 K08867 - qsa:O6P43_013615 533.102