Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00357 ATGGAGGCAAGCACACTCAAGTCTGGAGACGGGTATTCGGCGGACGAGCTACACCTACGGCGCTCTGGGGAAGTGAATGTGGACGATCCGGGTCAAACTGAAGTGAGGGATAGTGGAGGTGGTGGCTCCGGTAGTGGTGGGGTTGGAGCGAGGTATAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGTATTACTATACCTCCGGGGCTTAGTCCTTCTTCGTTTTTGGAGTCACCTGTGTTACTTTCCAACATTAAGGTGGAACCTTCCCCAACGACTGGATCTTTTACTAGGTCTCAGTTGATGCATGGTTCTTTCACATCCGTTGCGTTTCCTATGACTACAACAAGTTCCTCTAACACAATTTATGAGAGAAAATCCAGCTTTTTTGAGTTTAAACCACGTAATGCTTCTGACAAGATACAAGGTCAGTCTCTGGCTCAATCATTTGCCCCATCAATAACAGTTAAAAGTGAGACAGCAGCCTCGGCAAATGACTTAAATCTTTCTGCTTCCGTTCAAATGAATAATTCAGGTTCTACTGCCCCAGAACTTGATTCAGATGAATTGACCCCAGGAGGAAAATCAATGGCTAGTCTTCAATCATCAGGAACTGATGCTAAAGAAGGTGGCATTCCAGTTGTAGGTGAGAAGGTATGTGATGATGGTTACAACTGGAGAAAGTACGGGCAAAAGCATGTTAAAGGGAGTGAATTCCCACGAAGCTATTACAAGTGCACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGACGGTCAAATCACTGAGATAATCTACAAAGGAACACATGATCATCCAAAACCTCAACCTAGTCGTCGAAATACTGCAGGTACTACTATGTCCATACAAGACGAAAGACCTGATAAGGCTTCATCCTTGGCATGTCTTGATGATGCAGCAGCCAATGGGTATACTCAAATTTCCCAGACAAGTGAGCCAAATGCAACTCCTGATCGATCTCCCTTGGTGAAAAATGATGACGGTCCATATGGTCTGGGCTCTACATCTAATATTGTACATGACAATGCAGATGATGATGAAGATCCATTTTCAAAGAAGAGGAGAATGGACATTGGAAGTGTTGACATCACTCCTGTTCTCAAGCCCATCCGCGAACCACGTGTTGTTGTACAAACATTGAGTGAGGTGGATATTTTAGATGATGGGTACCGTTGGCGTAAATATGGGCAGAAGGTGGTGAGAGGAAATCCTAATCCAAGGAGTTATTACAAATGCACTAACGCGGGATGTCCTGTGAGGAAGCATGTTGAGAGAGCATCTCATGATCCAAAAGCAGTTATTACGACCTACGAGGGTAAGCATAATCATGACGTGCCTACAGCAAAATCCAGTAGCCATGACACAGCAGGTCCAGCAACTGCAAGTGCAATGACAAGAATTACCTCGGTGGAAAATAATGCAATTAGCCTCGATCTTGGGGTTGGCATTAACTCGGCTGCTGCTGAAAACAGATTGAATGGGCAAGGTCGGGGGCAGCTGTTGCATTCTGAATTTGGAGACAACCAAACTCAACCCAGTCATCCAAATATGAAGGTAGTTCGAACTAGTCACCCGGTTTCAGCTTATTTCGGTGTTGTTAATACAAATACTTATGGTTCTAGAGAGAGTTTGAGTGAAGGACACTCAATGGATGGCTCATCTCTAAATCATTCCACTTATCCTTACCCTCAGAGTATCGGAAGAATATTGACTGGACCATAG 1767 0.4477 MEASTLKSGDGYSADELHLRRSGEVNVDDPGQTEVRDSGGGGSGSGGVGARYKLMSPAKLPISRSPCITIPPGLSPSSFLESPVLLSNIKVEPSPTTGSFTRSQLMHGSFTSVAFPMTTTSSSNTIYERKSSFFEFKPRNASDKIQGQSLAQSFAPSITVKSETAASANDLNLSASVQMNNSGSTAPELDSDELTPGGKSMASLQSSGTDAKEGGIPVVGEKVCDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRNTAGTTMSIQDERPDKASSLACLDDAAANGYTQISQTSEPNATPDRSPLVKNDDGPYGLGSTSNIVHDNADDDEDPFSKKRRMDIGSVDITPVLKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKSSSHDTAGPATASAMTRITSVENNAISLDLGVGINSAAAENRLNGQGRGQLLHSEFGDNQTQPSHPNMKVVRTSHPVSAYFGVVNTNTYGSRESLSEGHSMDGSSLNHSTYPYPQSIGRILTGP* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00357 588 MobiDBLite consensus disorder prediction 319 333 - -
Pte5g00357 588 MobiDBLite consensus disorder prediction 355 369 - -
Pte5g00357 588 MobiDBLite consensus disorder prediction 274 305 - -
Pte5g00357 588 MobiDBLite consensus disorder prediction 177 217 - -
Pte5g00357 588 SUPERFAMILY WRKY DNA-binding domain 221 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 Pfam WRKY DNA -binding domain 402 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 Pfam WRKY DNA -binding domain 225 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 MobiDBLite consensus disorder prediction 319 369 - -
Pte5g00357 588 MobiDBLite consensus disorder prediction 13 31 - -
Pte5g00357 588 MobiDBLite consensus disorder prediction 556 576 - -
Pte5g00357 588 ProSiteProfiles WRKY domain profile. 396 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 MobiDBLite consensus disorder prediction 286 301 - -
Pte5g00357 588 FunFam WRKY transcription factor 33 388 454 - -
Pte5g00357 588 SMART WRKY_cls 401 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 SMART WRKY_cls 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 FunFam WRKY transcription factor 215 284 - -
Pte5g00357 588 Gene3D WRKY domain 219 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 Gene3D WRKY domain 386 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 MobiDBLite consensus disorder prediction 1 50 - -
Pte5g00357 588 ProSiteProfiles WRKY domain profile. 219 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 SUPERFAMILY WRKY DNA-binding domain 393 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00357 588 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 482 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00357 Pte-Chr5 3267886 3273872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00357 55 589 WRKY Transcription Factor Family AT4G26640 53.597 6.46e-178 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte5g00357 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00357 - - qsa:O6P43_013613 749.199