Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00350 ATGACTGAAAAAGATCACTACTTTGTGGAGTGGAAAGAGCATTTTGTTTCTCAAGAGCGCGGCAATCGTGTGGTTCACTATTTCCTGAAGGATACTGCTGGAGAATCTGTCCTTGCAGTTGTGGGCACTGAGAGAAGCCTTAGGCATATGTTCTATGTTGTTGCTGATGAGTTTCTGCAAACCTATGGAAAAGAGAGCTCCATCCAGGCTGGTTTTAAGTGGAGGTCTAGAAGGGAGGTTGTGGATTGGCTTACATCTATGTTATCGAAGCAGCATCGGCATGGATATGCAATCGAATCACCAAATAGTGATCTGGTGCAAGCTTCTACATCCCCAGGTTGTTTACCACGGACTAAATTAACCGATGATAAGGGACACAGTCTCAGTCTTGTGAAAGGGCGCAACTCAGATATTGTTTGGTCTGGAGTTGGATGGTCATGTGGGAAACAACTCAAGCATTATCCGGCTTTTAGTAGAAATGGAACTATGATAGCAATTCAGTCCTTTGTATATGTCATGGCCAAAGGAGACGATCACTATGTTGCATATTTGGAAGACATGTATGAAGATAGAAGGGGTCAGAAAAAGGTCAAAGTAAGATGGTTTCATCATATTCAGGAAGTCAAAGGCGTAGTTCCTGTGAGGAATCATCACCCTAGAGAAGTGTTTATTACACCTTACTCACAAGTGATTAGTGCAGAGTGTGTTGATGGTCCTACCTCAGTCTTAACTCGGGAACATTATGAAAAATGCTCGACTACTGTTTCTCCTGCCTCATTGGACAAAATTCATCTGTGTTTTAGGCAGTTCAGAAGTAATAGATTGAAGCCTTTTGACATTACTAAACTGGGTGGCTACCTTGAGCAACCAATTCTTTTAGCTCTTGATGGTTTCCTAAAGCATGATTATGTTCACCACGGCCGGACTACAGAAGATGGTGAAGATTTGGATGCTGGTGACAGTCTAAAGCTGGGAGGAAAAAGAACCAGGAGCGGTAGGGGATCTCCAAAGTTTTGGATAGGTCATCAGGGGGTTAGGAAGTTGAGTAGAGTTAATAGGACAACAACTTATGGGACCTATCAGGATATAAGCTATGTGCAGCCCAGTGGGAAAGTGCTAGCTCTAAAGCAGGTTGAGAGTAAATCTTGGTGTAATTCATACAAGGCTGATGACAAAATCGAGTTGCTCTGCCAAGATAGTGGCATCCGTGGCTGTTGGTTTAGGTGTACAATTGTGCAGGTAACAAGAAAACATTTCAAAGTCCATTATGATGATTTGCAGGATGAAGAAGGTTCTGGAAACCTTGAGGAGTGGATTCCTGCTTCAAAGCAAGCGTTGTCTGACAAACTTGGCATGAGGAAGTTGGGCCGCCCAACAATCCGCCCAACCCCTTCGTTGGAGGATGAAGGAGACCTAACTCTCGAGGTTGGAGCTGCGGTTGATGCATGGTGGAGTGATGGCTGGTGGGAAGGAGTCGTGACTGAAGTCACTGACTGTTCTGATGTTGTGCAAGTTTATTTCCCTGGTGAAAGTTTGTTGATGAGCTTTTGCAAAAATGATTTAAGAAGATCCAGGGATTGGTTGGGGGACCAATGGGTTGATATAAAAGCAAAGCCCTATGTGGTCTCTATGATAGTTGGAGGTGATAGGAAGCTATCCACGCCCTCCAATAATTCTAAAGATGTTGAGTTTGACACAGTACCCTCTCCTGAGGCTCCTCATTGTAATAAGTCCAATATCGGTGAGGAAAAGAAATTTGACTTAACTGCATCTGCTTCTTACAACGATGGTCCTCAAGAACCAAAGAGCATCGGAGACCCTTCTCCTGAGAAGGACAGTAGTGCTAAAAATGACAATGTTGACGTCAATGGTCATTCCAATGATCAAGAAATCAGTGATCAGAATGATGGTGAGACCAATGGCCACTGCAGTAAGCAAGCAGGAAACAGCGATGCCGATAAAAGTTGCAGTGAGAACACTGAGAACAAGGATGATGTTAACAATAAGGAAATGGAGGTGGTTGATTCAGCTAAGCAGGATTCTGAGCCCACTGAACTAATGGTAGTGGCTGTATAG 2076 0.4379 MTEKDHYFVEWKEHFVSQERGNRVVHYFLKDTAGESVLAVVGTERSLRHMFYVVADEFLQTYGKESSIQAGFKWRSRREVVDWLTSMLSKQHRHGYAIESPNSDLVQASTSPGCLPRTKLTDDKGHSLSLVKGRNSDIVWSGVGWSCGKQLKHYPAFSRNGTMIAIQSFVYVMAKGDDHYVAYLEDMYEDRRGQKKVKVRWFHHIQEVKGVVPVRNHHPREVFITPYSQVISAECVDGPTSVLTREHYEKCSTTVSPASLDKIHLCFRQFRSNRLKPFDITKLGGYLEQPILLALDGFLKHDYVHHGRTTEDGEDLDAGDSLKLGGKRTRSGRGSPKFWIGHQGVRKLSRVNRTTTYGTYQDISYVQPSGKVLALKQVESKSWCNSYKADDKIELLCQDSGIRGCWFRCTIVQVTRKHFKVHYDDLQDEEGSGNLEEWIPASKQALSDKLGMRKLGRPTIRPTPSLEDEGDLTLEVGAAVDAWWSDGWWEGVVTEVTDCSDVVQVYFPGESLLMSFCKNDLRRSRDWLGDQWVDIKAKPYVVSMIVGGDRKLSTPSNNSKDVEFDTVPSPEAPHCNKSNIGEEKKFDLTASASYNDGPQEPKSIGDPSPEKDSSAKNDNVDVNGHSNDQEISDQNDGETNGHCSKQAGNSDADKSCSENTENKDDVNNKEMEVVDSAKQDSEPTELMVVAV* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00350 691 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 280 665 - -
Pte5g00350 691 Pfam Agenet domain 390 464 IPR008395 -
Pte5g00350 691 MobiDBLite consensus disorder prediction 619 655 - -
Pte5g00350 691 ProSiteProfiles BAH domain profile. 162 281 IPR001025 GO:0003682
Pte5g00350 691 MobiDBLite consensus disorder prediction 550 564 - -
Pte5g00350 691 Gene3D - 131 279 IPR043151 -
Pte5g00350 691 SMART BAH_4 162 281 IPR001025 GO:0003682
Pte5g00350 691 MobiDBLite consensus disorder prediction 309 330 - -
Pte5g00350 691 CDD Tudor_Agenet_AtDUF_rpt1_3 387 464 - -
Pte5g00350 691 Pfam BAH domain 163 274 IPR001025 GO:0003682
Pte5g00350 691 MobiDBLite consensus disorder prediction 549 691 - -
Pte5g00350 691 MobiDBLite consensus disorder prediction 656 679 - -
Pte5g00350 691 MobiDBLite consensus disorder prediction 309 327 - -
Pte5g00350 691 SMART agenet_At_2 472 529 IPR014002 -
Pte5g00350 691 SMART agenet_At_2 385 450 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00350 Pte-Chr5 3201432 3206929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00350 399 527 PHD Transcription Factor Family AT5G58610 31.343 9.57e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00350 - - qsa:O6P43_021292 789.645