LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g00336	ATGCATTCAATAAACCATGTCTCCGTGCTTCTTTTCGTGGCGATTGTCTTGTTTTGTGAAGATATCTCTGCTAAGACCAACATGAGCTTTGATTTCGTGTCTTTCAATTCAAGAAACATCAGCCTTCTCGGTGATTCCTATCTCAGGAACGGTGTCATCGGTCTCACAAGAGAATCTGACGTCCCAACTTCAAGTGCGGGTTCAGTAATTTACAATAAACCCATTGCTTTCTTTGACCCCGAAACCAACATCACCGCTTCTTTCTCGACGTCCTTCTCTTTTGTCATCAGCAATGTCAATTCTGGCTCATACGGTGATGGGTTCTCTTTTTTCCTCTCACAAAGTAACCAGACTCTTGGCAGCCCAGGAGGGTTTCTGGGTCTTGTGAATTCTTCTCAGTTGACAAAGGAAAAGTTTGTAGCAGTTGAATTTGACACAAGGCTTGATTTCATTTTCAATGATCCGAATGACAATCATGTGGGGTTGGACATTGACAGTTTGATTTCCATCAAGACTGGAGATCCTGTCCTGCAACAGATTATTCTCAAGAGTGGGAATTCAATTACATGTTGGATTGATTACCAGAATGAAAAGAGACAGCTTGGAGTTTACATAAGCTATTCAAATGTCAAGCCACTCAATCCTGTTTTGGTTGTTGATATTGACCTCACTGATCATCTTAAATCGTCAAGATATGTGGGGTTTTCAGCATCCACGGAAGGGAGCACTGAACTTCATCATATTGAGAGTTGGAGATTTGAGACTACAGGTTTACATCCCAAGCCCCCAAGAACACATCCTCATAATGTTTCTGATAACATTGTAACAGTTGCAGTAGACATGCCAAATTCTCAAATCAACAAGAAACACAGAAGAAACGTTGGTTTAGGCGTTGGGATTGCAGGTCCAGCTTTTTTCTTCGTAGTTCTTGTGGTTTTGGGCTACATATCTGTGCAGAAATGGAAGGGTGCGAAGACACAGAGGAGCTTCAAATTCAAACCAGACCTTGTGACATGTCCTAGAGAATTCACATACAAAGAATTAAAGTCTGCAACAAAAGGGTTTCATTCCGGTAGGATCATAGGTCACGGTGCATTTGGGACTGTCTACAAAGCTTTCTTTATACCTACAGGAACAATTGCTGCAGTGAAAAGATCCAGACATTCACATGAAGGCAAAACAGAATTCCTTGCTGAATTGTCCATTATAGCTGGCTTGAGGCACAAGAATTTGGTCCAGTTACAAGGTTGGTGTGTTGAGAAAGGTGAGTTGTCGCTTGTCTATGATTTCATGCCAAATGGAAGCCTTGATGATATACTTTATCAAGAGCATGGAGCTAGAAAACTGTTGAATTGGTCTCAGAGGTTGAATATTGCTGTGGGGTTGGCTTCTGCTTTGGCTTACTTGCACCACGAATGTGAACAAAGAGTTGTCCACAGAGACATCAAGTCTGCAAATGTATTACTAGATGGTCACCTCAATGCGAGGTTGGGAGATTTCGGATTGGCGAAGCTCATGGATCATGACAAAAGCCCCGTGTCAACACTTACCGCTGGAACAATGGGATACCTTGCACCTGAGTATCTTCAGTATGGAAAGGCAACTGAGAAGACTGATGTGTTCAGCTATGGTGTGGTTGTACTTGAAGTAGCATGTGGAAGGAGGCCAATTGAAAAAGAGGAATCAAAAATGATGAATTTGGTTGACTGGGTTTGGGGGCTTCATGCTGAAGGAAAGATCATTGAAGCTGCAGACAAAAAATTGAATGGCGAATTCAATGAGGAAGAGATGAGGACACTGTTGTTTCTGGGGTTGAGTTGTGCAAACCCTGATAGTGAACAAAGGCCTTCAATGAGAAGAGTACTACAGATTCTTAATGGTGAGACAGAACCTATGGCTGTGCCTAAGAGAAAACCAAGCATCACTTTCTCCTGTGTGCTGCCTTCTACGCTTGATGACATTGTTGCAGAAAGTGAAATCCAAGATTTCCATTCTTGGAGTCCTGTGCATGAGATCAAAATCAACATAGCTTGA	2034	0.4223	MHSINHVSVLLFVAIVLFCEDISAKTNMSFDFVSFNSRNISLLGDSYLRNGVIGLTRESDVPTSSAGSVIYNKPIAFFDPETNITASFSTSFSFVISNVNSGSYGDGFSFFLSQSNQTLGSPGGFLGLVNSSQLTKEKFVAVEFDTRLDFIFNDPNDNHVGLDIDSLISIKTGDPVLQQIILKSGNSITCWIDYQNEKRQLGVYISYSNVKPLNPVLVVDIDLTDHLKSSRYVGFSASTEGSTELHHIESWRFETTGLHPKPPRTHPHNVSDNIVTVAVDMPNSQINKKHRRNVGLGVGIAGPAFFFVVLVVLGYISVQKWKGAKTQRSFKFKPDLVTCPREFTYKELKSATKGFHSGRIIGHGAFGTVYKAFFIPTGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELSLVYDFMPNGSLDDILYQEHGARKLLNWSQRLNIAVGLASALAYLHHECEQRVVHRDIKSANVLLDGHLNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVVLEVACGRRPIEKEESKMMNLVDWVWGLHAEGKIIEAADKKLNGEFNEEEMRTLLFLGLSCANPDSEQRPSMRRVLQILNGETEPMAVPKRKPSITFSCVLPSTLDDIVAESEIQDFHSWSPVHEIKINIA*	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g00336	677	SUPERFAMILY	Concanavalin A-like lectins/glucanases	28	261	IPR013320	-
	Pte5g00336	677	Pfam	Protein kinase domain	355	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g00336	677	SUPERFAMILY	Protein kinase-like (PK-like)	337	643	IPR011009	-
	Pte5g00336	677	FunFam	L-type lectin-domain containing receptor kinase VIII.1	431	643	-	-
	Pte5g00336	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Pte5g00336	677	ProSitePatterns	Legume lectins beta-chain signature.	140	146	IPR019825	-
	Pte5g00336	677	ProSiteProfiles	Protein kinase domain profile.	355	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g00336	677	FunFam	L-type lectin-domain containing receptor kinase VIII.1	317	430	-	-
	Pte5g00336	677	ProSitePatterns	Protein kinases ATP-binding region signature.	361	384	IPR017441	GO:0005524
	Pte5g00336	677	Gene3D	-	26	275	-	-
	Pte5g00336	677	SMART	serkin_6	355	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g00336	677	Gene3D	Transferase(Phosphotransferase) domain 1	431	646	-	-
	Pte5g00336	677	Gene3D	Phosphorylase Kinase; domain 1	316	430	-	-
	Pte5g00336	677	CDD	STKc_IRAK	361	627	-	-
	Pte5g00336	677	PANTHER	-	51	631	-	-
	Pte5g00336	677	FunFam	L-type lectin-domain containing receptor kinase VIII.1	26	266	-	-
	Pte5g00336	677	Pfam	Legume lectin domain	28	262	IPR001220	GO:0030246
	Pte5g00336	677	CDD	lectin_legume_LecRK_Arcelin_ConA	29	257	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte5g00336	Pte-Chr5	3100138	3102171	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g00336	27	662	Receptor kinase-like Gene Family	AT5G55830	63.594	0.0	828

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pte5g00336		Pkinase	7e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g00336	-		-	qsa:O6P43_021312	974.156