Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00323 ATGGACGTAAAAAGAGAGGATGAGATTGAAGACATGTCATTCCCACCATCAAGAATGGGATCCATGCATATTGCAGGGAGTAATAGCTTTGGTCACAACATAGAGTTCATGTCTCAAGCATACCTGAGAAATAGATACTCAGAGATTGACATAGAAGTTGACAATTTCACTACAAATAAGGATTCTCCTCTTCCTATATTCCTCAAGTTTGAAGATGTAGAGTTCAAGGTTAGGAACAGCAGAGCTCACTCCAACAATCCTGTGAAGGAAATAGTGAAAAAAGTTGCCTCACAACTTGACATGGATGGAGATAAGTATAAGAAGATTTTGAAGGGTATAACAGGAAGCATTGACCCTGGGGAAATACTTGCATTGATGGGTCCTTCTGGTAGTGGGAAGACGACTTTGCTCAAAGTGATAGGAGGAAGACTGCTGGACAATGTGAAAGGGAAAGTGACTTACAATGAGATTCCTTATAATCCTGCTGTTAAAAGAAGGATTGGATTTGTGACACAAGAAGATGTGCTCTTCCCACAGTTGACAGTTGAAGAAACACTTCTTTTTTCTGCATATCTGAGGCTCCCAAAGAACATTAGCAGACAGCAGAAACATGCCAGAGTAGAAAAAATCTTGAAGGATTTAGGTCTTGAAAGATGTCGAAATACGCGAGTAGGTGGAGGATTTATCAAAGGCATATCAGGAGGTGAAAGGAAGAGAACAAGTGTAGGTTACGAAATTCTAGTTGATCCTTCATTACTGTTGCTTGATGAACCAACTTCAGGCCTCGATTCCAATTCAGCACACAGACTTCTCCTCATTCTTCAGGGTCTTGCTAAGGCTGGAAGAACAATAATTACAACAATTCACCAGCCATCAAGCAGAACCTTTCACACGTTTGACAAGCTTCTCTTGATATCAGAAGGCAGTCCGGTGTACTATGGAAAGGCTAGGGAATCAATGGATTACTTTGCTTCGTTGAGATTTATTCCTCAAATGCCTATGAATCCTGCAGAGTTCTTGCTTGATTTGGCGACCGGGCAAGTGAATGACATGAGTGTTCCTGAAGATTTGGTGCAAGCTCAAGGGTCTGCTGACCCTGAGATGGCTGTCATTGAAGTAAGATATGCTTTCAAAGTTTTGCCTAAATACTCAAATGGTTTTCTCCCCAACTTAACCATAATTTTGTTTGAACAGTATATACAACTCAAATACAAGACTCTTCTGGAGCCCAAAGAGAAAGTAAATCATGAAGCAACAAAGGTATCAGAACATCTTCAAGCAGGCATTCAAACAAAGAAGGATTGGACATTGTCTTGGGTTGAACAATTCATGATTGTGTCGAAGAGAACATACAGAGAAAGGTGCAGAGATTATTTTGATAAACTGAGACTAGTCCAATCACTTGGAATTGCAGTTTTATTGGGCCTTCTTTGGTGGAAATCATCTACAAATACTGAAGCTAAACTTAGAGATCAAGTTGGTTTGATGTTCTACATATGTATATTTTGGACATCGTCGTCGATTTTTGGGGCAGTCTACGTTTTCCCTTTTGAACAGTACTACTTGGTGAAAGAAAGAAAGGCCGATATGTACAGATTAAGCGTATACTACGTCTGCAGCACATTATGTGATATGGTGGCACATATCTTCTATCCCACCATGTTCATGATTGTAGTGTACTTCATGGCTGGCTTTAAAAGGACTGCTACTTGTTTCTTACTAACATTGTTCGCCATCTTGTTGATTGCGATTACCAGTCAAGGTGCTGGAGAGCTATTTGGAGCAGCAGTTATGAGTACTCAGCGGGCTGGGATGGTTGCTTCATTGATACTTATGCTATTTCTCCTCACAGGAGGCTACTATCACATTCCAAAGTTCATGCGATGGTTAAAATATTTATCCTTCATGTTCTACGGTTTTCGGCTTCTGCTCAAAGTGCAGTATTCAGGAGATCAGTCATATGAATGTGAAAGCAAACACGGGTGTATGCCTCTGCAGAGTTCACCATCTTTTGACACAGTCAACCTGAATGGTGGCCTGCAAGAGGTATGGATTCTGCTAGCAATGGCTCTAGTCTATCGATTAGGCGCTTACTTCTGTCTCCGAAGAAGAATCAGTCTAAGCAACGTTTGA 2133 0.4083 MDVKREDEIEDMSFPPSRMGSMHIAGSNSFGHNIEFMSQAYLRNRYSEIDIEVDNFTTNKDSPLPIFLKFEDVEFKVRNSRAHSNNPVKEIVKKVASQLDMDGDKYKKILKGITGSIDPGEILALMGPSGSGKTTLLKVIGGRLLDNVKGKVTYNEIPYNPAVKRRIGFVTQEDVLFPQLTVEETLLFSAYLRLPKNISRQQKHARVEKILKDLGLERCRNTRVGGGFIKGISGGERKRTSVGYEILVDPSLLLLDEPTSGLDSNSAHRLLLILQGLAKAGRTIITTIHQPSSRTFHTFDKLLLISEGSPVYYGKARESMDYFASLRFIPQMPMNPAEFLLDLATGQVNDMSVPEDLVQAQGSADPEMAVIEVRYAFKVLPKYSNGFLPNLTIILFEQYIQLKYKTLLEPKEKVNHEATKVSEHLQAGIQTKKDWTLSWVEQFMIVSKRTYRERCRDYFDKLRLVQSLGIAVLLGLLWWKSSTNTEAKLRDQVGLMFYICIFWTSSSIFGAVYVFPFEQYYLVKERKADMYRLSVYYVCSTLCDMVAHIFYPTMFMIVVYFMAGFKRTATCFLLTLFAILLIAITSQGAGELFGAAVMSTQRAGMVASLILMLFLLTGGYYHIPKFMRWLKYLSFMFYGFRLLLKVQYSGDQSYECESKHGCMPLQSSPSFDTVNLNGGLQEVWILLAMALVYRLGAYFCLRRRISLSNV* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00323 710 Gene3D - 92 326 IPR027417 -
Pte5g00323 710 Pfam ABC-2 type transporter 441 648 IPR013525 GO:0016020|GO:0140359
Pte5g00323 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Pte5g00323 710 SMART AAA_5 119 309 IPR003593 GO:0016887
Pte5g00323 710 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 695 - -
Pte5g00323 710 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Pte5g00323 710 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Pte5g00323 710 FunFam ABC transporter G family member 22 97 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00323 Pte-Chr5 2994682 2997830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00323 108 318 Calmodulin-binding Proteins AT2G36910 30.769 2.59e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00323 K05681 - qsa:O6P43_013516 1112.06