Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00321 ATGAATGTGTTAACATTCTATAGGGTCCATAGGGATGCTCTCAACAATTGCAAGCAACACCTCATCCAAACTGCAAAACAAATGAAGTTGGATACAGAATATGAATGTATTGACAATGATAGATACATACAACAGAAGGAGGGCCATGCCCCTCTCTTGCATGAGACAATATTGGGCGTAGTATGGAGCTTAAGGTTTAGTGATCCTGGAGATTGTATAAACACTTGGCAAATGAACAACCAGTCCGCTATTCCATCTGAGTCATCGTGTAATTCAAGTATGAGCATGGATTCGCTATCTTCAAATTATTCATCAGGAGCACAACATTTAATCGCTGGTGGCAGAAGCAGGTCTCCTATTGCCACAACACAGACATCTTTTTTAGTTAGATTGGCCATGAGAACATCGAGAGCGAGGTGGTTTACCTTTTTAAGAAGAGTGTTTCATTATCAGAATGGGTCAAGGTCTGATCTTGGGTCCAACCCTTTCAATTCTAGCACGTGGATGACCATGGAGCTCATTGCTTTGATGACTCAGATAACCATCATAACATTCAATTTGGCAATTTCAAAGAGTGAGAAACCAGTTTGGCCTATGAGAATTTGGATAGTGGGATATGACATAGGTTGTGTTCTTAATCTGCTGCTACTTTATGGGCGTTACCATAGTCTACATTTTAGTCAAGGAGAAGCGTTTGGCCTTTCTGATGTTGAACAGCAGAGGACCAGTGAAGAATCCAGGATCACACATTTGACTAACAAATGTCGCACTTCGCTTGAGCTTTTCTTTGCAATATGGTTTGTGATGGGTAATGTCTGGGTGTTTGATTCTCGGTTTGGATCTTTTGATCAAGCTCCAAAGCTTCATGTGCTCTGCATATCCTTGCTTGCTTGGAATGCAATAAGCTATTCTTTCCCATTCCTACTGTTTTTGCTGCTGTGCTGCTGCGTACCACTGATAAGCAGCTTCATTGGATACAACATGATCAACATGGGGTCAACTGATCGAGGCGCTTCAGATGATCAGATATCACAGCTACCAAGTTGGAGATATAAAGAAATTGACTCAAGGTTGGAACTTGGCAAGGACTTTGAGAACAGTGAAGGTCATGAAAACAGAGATCCAGAATGCTGTATTTGCTTGGCGATGTACAAAGACAAGGACGAATTGAAGCTAGAGATTCTCAATGATCCTGCTTTTGAAAATGATGAAGATTCACGTAAATGGGTCAAGCAGCTTCAAGCTAGTTTTCTTGTCATGGATGATATTGTGGATAATTCATTAACTCACAGTGGTCAACCGTGTTGGTTCAGACAACCAAAGGTCGGCATGATTGCTATCAATGATGGTCTGCTACTCCGCAACCATATACCCAGAATTCTCAAGTGGCATTTTAAAGGAAAGCCTTATTATGTTGATCTGTTGGAGATATTTAGTGAGGTGAATGAGGATGATGATTATCTGAATTGTTATGGCGATCCTGGAGTTATTGGCAAGGTAGTAACAGATATTGAGGATTTCAAATGTTCATGGTTGGTTGTGAAAGCATTGGAACTTGCTGATGATGAGACAAAAAAACCTTATATATAA 1590 0.4057 MNVLTFYRVHRDALNNCKQHLIQTAKQMKLDTEYECIDNDRYIQQKEGHAPLLHETILGVVWSLRFSDPGDCINTWQMNNQSAIPSESSCNSSMSMDSLSSNYSSGAQHLIAGGRSRSPIATTQTSFLVRLAMRTSRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTMELIALMTQITIITFNLAISKSEKPVWPMRIWIVGYDIGCVLNLLLLYGRYHSLHFSQGEAFGLSDVEQQRTSEESRITHLTNKCRTSLELFFAIWFVMGNVWVFDSRFGSFDQAPKLHVLCISLLAWNAISYSFPFLLFLLLCCCVPLISSFIGYNMINMGSTDRGASDDQISQLPSWRYKEIDSRLELGKDFENSEGHENRDPECCICLAMYKDKDELKLEILNDPAFENDEDSRKWVKQLQASFLVMDDIVDNSLTHSGQPCWFRQPKVGMIAINDGLLLRNHIPRILKWHFKGKPYYVDLLEIFSEVNEDDDYLNCYGDPGVIGKVVTDIEDFKCSWLVVKALELADDETKKPYI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00321 529 Gene3D Farnesyl Diphosphate Synthase 358 483 IPR008949 -
Pte5g00321 529 Gene3D Farnesyl Diphosphate Synthase 484 529 IPR008949 -
Pte5g00321 529 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 93 391 - -
Pte5g00321 529 Pfam Polyprenyl synthetase 399 481 IPR000092 GO:0008299
Pte5g00321 529 Pfam Polyprenyl synthetase 485 525 IPR000092 GO:0008299
Pte5g00321 529 SUPERFAMILY Terpenoid synthases 410 526 IPR008949 -
Pte5g00321 529 Coils Coil 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00321 Pte-Chr5 2972616 2987505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00321 112 354 C3H Transcription Factor Family AT5G55970 74.590 6.58e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00321 - - qsu:112039218 449.514