Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00313 ATGAGAAATGCTTGGCTTCTGCCCCCTGTTTCTTTTTCTGAAGTACTCATGTGCTCAAAGCTGTTTGAGGAAGACAAGCTCAAGCCATTTGCACTTGCAAAGTTGCATGGGTATTTTAATCAAACTATTCTCTCCTTTTTGAATGGTCCTACGCCTTCCAATGAGAAAAAGTGCCCTAAATATGTTGGAGACGATGAAATTTTCACTCAAGATGATCCTTTGAGATCTATTTGCATGAAGAATAGAAATTGTAACACTTATCCAGGATTGGAAAATGGGAATTTTGATCAACAAGCTTCCATACGTGTGGAACAGGTTACCAGTTGCAAGCATATATATCCTAAGTTGAAACTAAGGGTTTCCAGGGAAAAAATAGGTGTTAAATTTGTTGGACTGCAGCACCAAGTTGATCTCCCATTTAAGGTTGATAACAAAATAGAGCTTCTTTGTCAAGATAGTGGCATTCGAGGATGTTGGTTTAGGTGTAAGATCTTGTCCGTATCCCAAAAGCTTTTGAAAGTTCAATATGAAGATGTGGAAGATGTGGAGGGACAAGGCAAGTTAGAGGAATGGGTCCCTGCATGTAGAGTTGCAGCTCGTGATAAACTGGGAATCAGATGTCCAGGTCGCCTGACAATACGGCCATTTCCACCTGAAGATTCTACTGACCTCAACAGTTTTGAGTTTGGGGCCGCAGTTGATGCATGGTGGAGTGATGGATGGTGGGAAGGTGTTGTAACTAGAATTAACGTTTCAGGAATGAGCACCCTGCAAGTGTATTCCCCTGGTGAAGACAAATTGCTGGTTGTTGAGAGAAAGGATGTGAGGACTTCCCGAGATTGGGATGGCAACAGGTGGGTCAAAGTTATGATGAAGTCTGATATTCTGGATCAGTTTCCATCGTGTGTCGGTTTCAGCACAGATTTCAGCACAAAACAGTCAGCACCTGCTACGTGGAATGGATCCACTTCCTGTGGTTCTGCAGTTTCGGATGATAGAGCTGTCATAGCCAAAGCTGCTGAATGTGACAAGGCTGAGTTATATGATATTGATGTTTCAGATGACTGTGAAAGTACGAAGGGGTTGAAGTTCAGGAACCGGCTCCCCATCATTGAAGAAGATAAAGATACTGATGGCAATCGTTTTAGTATTCTGAAATAG 1161 0.4238 MRNAWLLPPVSFSEVLMCSKLFEEDKLKPFALAKLHGYFNQTILSFLNGPTPSNEKKCPKYVGDDEIFTQDDPLRSICMKNRNCNTYPGLENGNFDQQASIRVEQVTSCKHIYPKLKLRVSREKIGVKFVGLQHQVDLPFKVDNKIELLCQDSGIRGCWFRCKILSVSQKLLKVQYEDVEDVEGQGKLEEWVPACRVAARDKLGIRCPGRLTIRPFPPEDSTDLNSFEFGAAVDAWWSDGWWEGVVTRINVSGMSTLQVYSPGEDKLLVVERKDVRTSRDWDGNRWVKVMMKSDILDQFPSCVGFSTDFSTKQSAPATWNGSTSCGSAVSDDRAVIAKAAECDKAELYDIDVSDDCESTKGLKFRNRLPIIEEDKDTDGNRFSILK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00313 386 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 138 298 - -
Pte5g00313 386 Pfam Agenet domain 144 218 IPR008395 -
Pte5g00313 386 SMART agenet_At_2 225 283 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00313 Pte-Chr5 2902992 2905902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00313 152 282 PHD Transcription Factor Family AT5G58610 26.667 6.24e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00313 - - gmx:100812434 338.191