Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00303 ATGGGAGATCAACAAGGTGTGCTGAAAGTCATAGTTGTGCAGGGAAAGAGGTTGGTAATTCGGGATTTCAAGTCGAGCGATCCTTATGTTGTAGTCAAGTTGGGAAATCAGACTGTGAAGACCAAAGTGATTAACAGCTGTTTGAATCCTGTCTGGAATGAAGAACTAAGTTTCAGTTTGACAGAACCAGCTGCAGGAGTTTTAAATCTGGAAGTGTTTGATAAAGACTTTCTGAAGTCAGATGACAAGATGGGACACGCATATTTGAACCTTCAACCCATTTTCTCTGCTGCTAGATTAAGAAACATATTGGGGGTTTCCTCCGGGGAGACTACTTTAAGAAAAGTGATTCCAGATAGTGAAAACTGTCTTGTCCGGGAGAGCAGCATCAACAGTATCAATGGTGAGGTGGTACAGAATGTTTGGTTAAGACTCCGTGGTGTTGAATCTGGGGAGATTGAAATAACACTCAAGCTAATTGCTCCCCCTACTTGCTCAACATAA 504 0.4206 MGDQQGVLKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTVKTKVINSCLNPVWNEELSFSLTEPAAGVLNLEVFDKDFLKSDDKMGHAYLNLQPIFSAARLRNILGVSSGETTLRKVIPDSENCLVRESSINSINGEVVQNVWLRLRGVESGEIEITLKLIAPPTCST* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00303 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 162 IPR044562 -
Pte5g00303 167 SMART C2_3c 7 103 IPR000008 -
Pte5g00303 167 Gene3D C2 domain 3 162 IPR035892 -
Pte5g00303 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 160 IPR035892 -
Pte5g00303 167 Pfam C2 domain 7 99 IPR000008 -
Pte5g00303 167 CDD C2_ArfGAP 6 151 - -
Pte5g00303 167 PRINTS C2 domain signature 46 59 IPR000008 -
Pte5g00303 167 PRINTS C2 domain signature 22 34 IPR000008 -
Pte5g00303 167 PRINTS C2 domain signature 68 76 IPR000008 -
Pte5g00303 167 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00303 Pte-Chr5 2850513 2854014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00303 6 160 C2H2 Transcription Factor Family AT4G05330 41.401 1.03e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00303 - - pcin:129304892 276.559