Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00300 ATGTCTGAAAGAAATGGTTATTTTGTGAACTGGGAGGAGCATATTATATGTCGAGACAAAGGGCGTCGTTTAATTCATTTTTATTTGAAAGATGAGTCTGGCAATTCAGTGCTTGCTGTTATAGGGACTGAGAGGAGTATAAGGCATATGTTGTATGTGGTTCCGGACGAGTTTTTGAGAGTTTATGGAATGAAGGAATCAATCAAAGTTTTTAAATGGCGGGCTAGAAGGGAGGTAGTGGTGTGGCTCCAATCTTTGGTATCTAAGCATAGACAGTTGCTTTCCAATGTCTCAAAATTACAACTGAATGATTCAAAGCAAGCTATAGAATCTCCTAATATTTCAACTGAACCTGATCAAACTCATCCACCTGATCCATTGGTTCAGAGGAGATTGAAATTCAGAAGTTCAGATATTGAATGGTCTGGTGTTGCTTGGTCCTGTGCGAAGCAGCTTAAGCACTATTCAGCCTTTTGCAGAAATGCAACAGTTATAACTGTTCATTCTTTTGTCCATATTATAGCTGAAGAAGAAAGTGGTCACCTTGGGTATATTGAAGATATGTACGAAAATAGTAAAGGACAGAAAAGGGTAAAAGTTCGCTGGTTCATCGGCTGTCGGGAAGTCAAGGGCGTGATTCTAGAACTGAATCCACACCCAAGAGAAGTATTCATCACACCTCATGTTCAGGTCATCAGTGCTGAGTGCATTGATGGTCCTGCAACGGTTTTGACACCTAAGCATTATGAGAAATGCTTGGCTTCTGCCCCCTGTTCTTTTTCTGAAGTACTCATGTGCTCAAAGCTGTTTGAGGAAGACAAGCTCAAGCCATTTGCACTTGCAAAGTTGCATGGGTATTTTAATCAAACTATTCTCTCCTTTTTGAATGGTCCTACGCCTTCCAATGAGAAAAAGTGCCCTAAATATGTTGGAGACGATGAAATTTTCACTCAAGATGATCCTTTGAGATCTATTTGCAAGAAGAATAGAAATTGTAACACTTATCCAGGATTGGAAAATGGGAATTTTGATCAACAAGCTTCCATACGTGTGGAACAGGTTACCAGTTGCAAGCATATATATCCTAAGTTGAAACTAAGGGTTTCCAGGGAAAAAATAGGTGTTAAATTTGTTGGACTGCAGCACCAAGTTGATCTCCCATTTAAGGTTGATAACAAAATAGAGCTTCTTTGTCAAGATAGTGGCATTCGAGGATGTTGGTTTAGGTGTAAGATCTTGTCCGTATCCCAAAAGCTTTTGAAAGTTCAATATGAAGATGTGGAAGATGTGGAGGGACAAGGCAAGTTAGAGGAATGGGTCCCTGCATGTAGAGTTGCAGCTCGTGATAAACTGGGAATCAGATGTCCAGGTCGCCTGACAATACGGCCATTTCCACCTGAAGATTCTACTGACCTCAACAGTTTTGAGGTTGGGGCCGCAGTTGATGCATGGTGGAGTGATGGATGGTGGGAAGGTGTTGTAACTAGAATTAACGTTTCAGGAATGAGCACCCTGCAAGTGTATTCCCCTGGTGAAGACAAATTGCTGGTTGTTGAGAGAAAGGATGTGAGGACTTCCCGAGATTGGGATGGCAACAGGTGGGTCAAAGTTATGATGAAGTCTGATATTCTGGATCAGTTGCCATCGTGTGTCGGTTTCAGCACAGATTTCAGCACAAAACAGTCAGCACCTGCTACGTGGAATGGATCCACTTCCTGTGGTTCTGCAGTTTCGGATGATAGAGCTGTCATAGCCAAAGCTGCTGAATGTGACAAGGCTGAGTTATATGATATTGATGTTTCAGATGACTGTGAAAGTACGAAGGGGTTGAAGTTCAGGAACCGGCTCCCCATCATTGAAGAAGATAAAGATACTGATGGCAATCGTTTTAGTATTCTGAAATAG 1905 0.4168 MSERNGYFVNWEEHIICRDKGRRLIHFYLKDESGNSVLAVIGTERSIRHMLYVVPDEFLRVYGMKESIKVFKWRARREVVVWLQSLVSKHRQLLSNVSKLQLNDSKQAIESPNISTEPDQTHPPDPLVQRRLKFRSSDIEWSGVAWSCAKQLKHYSAFCRNATVITVHSFVHIIAEEESGHLGYIEDMYENSKGQKRVKVRWFIGCREVKGVILELNPHPREVFITPHVQVISAECIDGPATVLTPKHYEKCLASAPCSFSEVLMCSKLFEEDKLKPFALAKLHGYFNQTILSFLNGPTPSNEKKCPKYVGDDEIFTQDDPLRSICKKNRNCNTYPGLENGNFDQQASIRVEQVTSCKHIYPKLKLRVSREKIGVKFVGLQHQVDLPFKVDNKIELLCQDSGIRGCWFRCKILSVSQKLLKVQYEDVEDVEGQGKLEEWVPACRVAARDKLGIRCPGRLTIRPFPPEDSTDLNSFEVGAAVDAWWSDGWWEGVVTRINVSGMSTLQVYSPGEDKLLVVERKDVRTSRDWDGNRWVKVMMKSDILDQLPSCVGFSTDFSTKQSAPATWNGSTSCGSAVSDDRAVIAKAAECDKAELYDIDVSDDCESTKGLKFRNRLPIIEEDKDTDGNRFSILK* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00300 634 ProSiteProfiles BAH domain profile. 163 281 IPR001025 GO:0003682
Pte5g00300 634 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 386 548 - -
Pte5g00300 634 SMART agenet_At_2 473 531 IPR014002 -
Pte5g00300 634 SMART BAH_4 163 281 IPR001025 GO:0003682
Pte5g00300 634 Pfam BAH domain 169 274 IPR001025 GO:0003682
Pte5g00300 634 Pfam Agenet domain 392 466 IPR008395 -
Pte5g00300 634 Gene3D - 130 289 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00300 Pte-Chr5 2834503 2838964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00300 400 530 PHD Transcription Factor Family AT5G58610 26.667 1.45e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00300 - - qsa:O6P43_012030 679.093