Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00298 ATGCAAACATCAAAGAAGTGTCAGAATCCAGCCAGTATTCATGGGTTGTATCACCAGCCCGTGGAAGATATCGATCACTACCAATTGCCTCATTTTCAAATTCTGGAAAATAATGTGTATATGGAAATTAGTAGTCAAGCAACAAATGTATCCTTTGGGAACTTAAAGGAACAGTATTTTACCCTCGAGTCGTCTTCAGCAACCGCAGGTGCCAGCCTTTGTGATTCCCCTTCTGGTGCAAGTGTCTCATCTAGCAGGAGTCCATTTTCACCTCAAGTTTCCCAGTCATGCTTGTCTGATCAGCATCATTCCTCTGATAACACCTATGGATCACCAATTAGTGGGACATCAAGTGCTGACGCTAGCAATGGATTGAAGCATAAATTAAAGGAACTTGAGATTTCATTATTGGGGCCTGAATCAGATATTGCTAACAGTTGTTACTGCTGCTTCAAGGGTGGGTTCCTGCAAGACTCATCTGACCGAGATCAACTGATGGCAATGATCCCCAGGTTGAACTTGAGACAGGTCCTGATTGCCTGTGCGCAAGCAATAGCTGATACTGATATGCCAAAGGCATTGGCCTTCATGGATGTGTTGGGACAAATGGTATCAATTTCTGGGGAGCCAATACAACGGTTAGGTGCTTACTTGTTAGAAGGTCTACGAGCAAGGTTGGAGTCATCAGGGAGTTCAATCTACAAAGCTTTGAAATGTGAAGAACCAACTAGCTCAGAACTGATGAGTTATATGCATATCCTTTATCAGATTTGCCCATACTGGAAGTTTGCTTACACATCTGCAAATGCTGTTATTATAGAAGCAATGGAGAATGAACCCAGAATTCATATCATTGACTTTCAGATTGCACAGGGTAGTCAGTGGATTTCTTTTATCCAAACTGTTTCTGGTCGATGTGGCGGTCCTCCATATATTCGTATCACTGGTGTTGATGATTCTCAATCATTTCATGCACGGGGCGGAGGACTTCATATTGTAGGCGAAAGGTTAGCAAAAGTTGCTGAATCATGTGGAGTCCCATTTGAGTTCCATAGTGCTGCCATGTCTGGTTGTGAGGTACATCTCCAAAATCTCTGGATTCGACCTGGGGAAGCTATTGTTGTAAATTTTCCATTTGTACTGCACCATATGCCTGACGAGAGTGTGACAATACAGAATCATAGAGATAGGTTAATGAGGTTAGTCAAGAGCTTATCACCAAAAGTCGTGACGCTCGTCGAGCAGGAATCAAACACCAACACTTCACCGTTCTTTCAGAGGTTCCGTGAGACACTAGATTATTACACAGCTATGTTTGAATCAATTGATGTAGCACTTCCTAGAGATGAGAAGAAGAGAATCAGCGCAGAACAGCAGTGTGTAGCCAGAGACATAGTGAACATGATTGCTTGTGAGGGGATTGAAAGGGTTGAACGACATGAACTTCTAGGAAAGTGGAGGTTAAGGTTTAGTATGGCTGGTTTTACCCCATACCCTTTAAGCAATTCAGTAACAAATGCAGTCAAAGGTGTGTTGCAAGAGTACAATGAGAACTACACGCTTCAAGAAAGGGCTGGAGCACTCTATCTTGGTTGGAAGAGCAGAGATATGGCCACCTCTTCTGCGTGGAGATGA 1635 0.4312 MQTSKKCQNPASIHGLYHQPVEDIDHYQLPHFQILENNVYMEISSQATNVSFGNLKEQYFTLESSSATAGASLCDSPSGASVSSSRSPFSPQVSQSCLSDQHHSSDNTYGSPISGTSSADASNGLKHKLKELEISLLGPESDIANSCYCCFKGGFLQDSSDRDQLMAMIPRLNLRQVLIACAQAIADTDMPKALAFMDVLGQMVSISGEPIQRLGAYLLEGLRARLESSGSSIYKALKCEEPTSSELMSYMHILYQICPYWKFAYTSANAVIIEAMENEPRIHIIDFQIAQGSQWISFIQTVSGRCGGPPYIRITGVDDSQSFHARGGGLHIVGERLAKVAESCGVPFEFHSAAMSGCEVHLQNLWIRPGEAIVVNFPFVLHHMPDESVTIQNHRDRLMRLVKSLSPKVVTLVEQESNTNTSPFFQRFRETLDYYTAMFESIDVALPRDEKKRISAEQQCVARDIVNMIACEGIERVERHELLGKWRLRFSMAGFTPYPLSNSVTNAVKGVLQEYNENYTLQERAGALYLGWKSRDMATSSAWR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00298 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 537 IPR005202 -
Pte5g00298 544 MobiDBLite consensus disorder prediction 83 117 - -
Pte5g00298 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Pte5g00298 544 Pfam GRAS domain family 174 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00298 Pte-Chr5 2818651 2822576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00298 1 544 GRAS Transcription Factor Family AT4G17230 60.183 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g00298 GRAS 4.5e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00298 - - qsa:O6P43_012018 813.527