Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00283 ATGGAAGTTTTCGCCTTCACAACAATAATCTTCTCAATCTTCGGTGTCGTCGCCTCCATTCTTGCCACCATCTGCTGTACTAGACCCGCCTCTACGAATCTGTTCCGCTTAGCATTGATTCTCACAGCAACAGTTTGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAGATGAAACCTCTCATTGTCCCGGTGCTAAGTGATGGGGAGTAA 216 0.4676 MEVFAFTTIIFSIFGVVASILATICCTRPASTNLFRLALILTATVCCWMMWAIVYLAQMKPLIVPVLSDGE* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00283 71 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
Pte5g00283 71 Pfam ATP synthase subunit H 5 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00283 Pte-Chr5 2749179 2751872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00283 4 72 Primary Pumps ATPases(2) AT5G55290 63.768 2.21e-28 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00283 K02153 - mus:103981350 112.079