Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00275 ATGGCGCCTTCGTGTTTTCGTGGACTACGGCTGCGGAGGTCCAGGAGTAACAGCATACCTTTGCCAATAACTTCTCCTTCAAGGACCCAGGTGGATTCTGATATGGAAAATATGGAAAGGAAGAGATTTGACAGCTTGGAATCATGGTCTATGATATTGGAGTCTGACAATGTAGAGACATGGGAACCTACAAATAAAGAGAGAGAGGAATGGACTGCTGACCTTTCTCAGCTTTTCATTGGCAACAAGTTCGCTTCTGGAGCTCACAGTCGGATATACCGTGGAATTTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAGGGTTCCAACCCATAAGGAAGAGGGTAGGGCCTTAATTGAGCAGCAATTCAAATCTGAAGTGGCTTTGCTCTCACGTCTTTTTCATCCAAACATAGTTCAGTTCATTGCAGCTTGTAAAAAACCGCCAGTCTATTGTATCATAACTGAGTACATGTCACAAGGAACTCTGAGGATGTACCTAAACAAGAAAGAGCCATATTCTTTGTCAACGGAGACAATTCTGAGATTAGCCCTTGACATATCCAGGGGTATGGAGTACCTTCATTCACAAGGTGTCATTCATAGAGACCTCAAATCAAATAACTTACTTCTCAACGATGAGATGAGGGTTAAGGTTGCAGATTTCGGCACATCTTGTCTTGAATCACGTAGCAAGGAAACAAAAGGAAACATGGGGACATACCGTTGGATGGCGCCTGAGATGATAAAGGAGGAACATTATACTCGGAAAGTTGATGTATACAGTTTTGGAATTGTGCTTTGGGAGCTCACAACAGCTTTGCTTCCTTTTCAAGGAATGACCCCAGTGCAAGCTGCGTTTGCTGTCGCGGAAAAGAATGAAAGACCTCCTCTCCCTGCCAGTTGTCAGCCAGCACTGGCACAACTCATAAAGCGATGCTGGGCAGTGAATCCCTCAAAGAGACCAGATTTCTGTGACATTGTTGCTGCTTTGGAGAATTATGATGAGTGCGTGAAGGAAGGTCTTCCTATGACTTATCACTCAAGGTTGGTCAACCGCAACGCCATTCTTGGACGATTGAAAGGCTGCGCTTCTCTAAGATCATCATCTATACCTGTACATGCTTGA 1131 0.4447 MAPSCFRGLRLRRSRSNSIPLPITSPSRTQVDSDMENMERKRFDSLESWSMILESDNVETWEPTNKEREEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRVPTHKEEGRALIEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLESRSKETKGNMGTYRWMAPEMIKEEHYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAQLIKRCWAVNPSKRPDFCDIVAALENYDECVKEGLPMTYHSRLVNRNAILGRLKGCASLRSSSIPVHA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00275 376 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00275 376 SUPERFAMILY Protein kinase-like (PK-like) 53 332 IPR011009 -
Pte5g00275 376 PRINTS Tyrosine kinase catalytic domain signature 194 212 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 PRINTS Tyrosine kinase catalytic domain signature 303 325 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 PRINTS Tyrosine kinase catalytic domain signature 156 169 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 PRINTS Tyrosine kinase catalytic domain signature 259 281 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 PRINTS Tyrosine kinase catalytic domain signature 240 250 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Pte5g00275 376 SMART serkin_6 78 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00275 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pte5g00275 376 FunFam serine/threonine-protein kinase HT1 161 354 - -
Pte5g00275 376 Gene3D Transferase(Phosphotransferase) domain 1 161 353 - -
Pte5g00275 376 FunFam Serine/threonine-protein kinase isoform 1 68 160 - -
Pte5g00275 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 335 - -
Pte5g00275 376 Pfam Protein tyrosine and serine/threonine kinase 80 332 IPR001245 GO:0004672|GO:0006468
Pte5g00275 376 CDD STKc_MAP3K-like 85 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00275 Pte-Chr5 2699038 2701981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00275 1 377 MAP Kinase Kinase Kinase AT1G62400 79.028 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte5g00275 PK_Tyr_Ser-Thr 1.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00275 - - mnt:21396785 651.744