Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00272 ATGAAAGTTGATGACTTTGAAGATGGGATGTCTCAGGTTGAGGCCGAAGAAAACCCATTTCCTCTTATCAGTAATGATAATTCACTGTCACTCAATCCTGTCATCAACCGCGATGCCAATGACAGAAATGATGAGGAGATTTTTGTTCCTCCACTGAACTTCTCAATGGTTGATAATGGCATTTTCCGCTCTGGTTTTCCTGATTCTGCTAACTTCGGCTTCCTGAAATCTCTTAGACTTCGTTCTATTATATATCTGTGCCCTGAAGAATACCCGGAAGGTATGTCAGAGTTTGTGAAGACATATGGGATTAAGCTTTTTCAGTTTGGAATCGATGGCTGCAAGGAGCCTTTTGTGAACATCCCAGAGGAAACAATTCGGGAAGCATTGAAGGTAGTTCTAGATGTTAAGAACCACCCGCTCCTGATTCACTGCAAAAGGGGGAAGCACCGGACCGGCTGTCTCGTTGGATGCCTAAGAAGATTGCAGAGATGGTGTTTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCCGCTGCTAAAGCAAGGTTATCAGATCAGAGGTTCATTGAGTTGTTCGACATAACCAGCCTTAAGCACGTGCCCATGTCATTTTCTTGTTTAAGAAGCTAA 633 0.4297 MKVDDFEDGMSQVEAEENPFPLISNDNSLSLNPVINRDANDRNDEEIFVPPLNFSMVDNGIFRSGFPDSANFGFLKSLRLRSIIYLCPEEYPEGMSEFVKTYGIKLFQFGIDGCKEPFVNIPEETIREALKVVLDVKNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAAAKARLSDQRFIELFDITSLKHVPMSFSCLRS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00272 210 CDD PFA-DSP_Siw14 48 194 - -
Pte5g00272 210 ProSiteProfiles Dual specificity protein phosphatase domain profile. 53 207 IPR020422 GO:0006470|GO:0008138
Pte5g00272 210 Gene3D Protein tyrosine phosphatase superfamily 47 197 IPR029021 -
Pte5g00272 210 ProSitePatterns Tyrosine specific protein phosphatases active site. 143 153 IPR016130 GO:0016311|GO:0016791
Pte5g00272 210 PANTHER TYROSINE-PROTEIN PHOSPHATASE 45 198 - -
Pte5g00272 210 FunFam probable tyrosine-protein phosphatase At1g05000 47 197 - -
Pte5g00272 210 Pfam Tyrosine phosphatase family 49 200 IPR004861 -
Pte5g00272 210 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 195 IPR029021 -
Pte5g00272 210 PRINTS Plant and fungal dual specificity phosphatase signature 48 65 IPR020428 GO:0016791
Pte5g00272 210 PRINTS Plant and fungal dual specificity phosphatase signature 85 98 IPR020428 GO:0016791
Pte5g00272 210 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Pte5g00272 210 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00272 Pte-Chr5 2672463 2675414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00272 33 207 Protein tyrosine phosphatase (PTP) family AT4G03960 72.000 1.98e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00272 K18045 - qsa:O6P43_031297 315.079