LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g00263	ATGGCACAAGGGTGCTTGTTACCTAGTCCAAAACGGGAAAGCAGTATAACGGATGGACCGAACACGCTATACATACTTGCTAGTTCCTTCAAAATGTTTCCGTTGATCTTTATTCACGTTAGTGTTGTGCTGCCTTCATCTTCTGTCTTTTTGCATCATGCTAGAAAATTGAAAGATACTCCGGGAGTGAAATTGGTAGAGAAAGATAGAGGAGCCAGATTGATGACAACATACACTCCCGAATTTCTGGGCTTACCCAATGGGACGTGGACACAAGAAGGAGGTGATAGAAATGCAGGTGATGGAGTTGTAATTGGTTTCATTGACAGTGGAATCAACCCACAGCATCCAAGCTTTGCTTATGATCCTACAAATCCCTTTACTTCCAACCTTTCTCACTTCACCGGGGCTTGTGAGACGGGTCCGAAATTTCCAGCTACTTCCTGCAATGGAAAGATTGTTTCAGCAAGATATTTCTCAGCTGGGGCTCAAGCAGTTGCTGTCCTCAACTCTTCATTAGATGTTCTTTCACCATTTGATGAAGATGGACATGGCAGTCATGTGGCATCAACAGCTGCTGGAAATGCTCGAGTGCCGGTCGTCGTGGATGGATTCTTTTATGGACAAGCCAGTGGCATGGCACCGCGAGCAAGAATTGCTGTTTACAAGGCTATCTACCCAACAGTGGGAACTCTTGCAGATGTGGTTGCAGCCATTGATCAAGCTATACTAGACGGGGTAGACATTTTAACGTTGTCTGTTGGACCAAATGAACCACCAGAAGGTGCACTGACTTTCTTAAACATATTTGACATCAGTTTGCTGTTTGCAAGAAGAGCTGGAGTTTTTGTCGTACAAGCAGCTGGGAATAAAGGCCCTGCATCTTCAAGCGTAGTGTCATTTAGCCCTTGGGCCATGGGTGTAGCTGCTTCAAGCACAGACAGAACTTACCCTGGCTCCCTTCTTCTTGGAAATGGCCAAAGAATTAGTGGTGTGGGAATGTCAGGACCAACTTTTGGAGAGGACTTTTTCATGTACGAGCTTGTGTCAGCTAAGGATGCTATCAAAACTAATGGAACCTTTCCTACAACTCCTCAGTATGTAGAAGAATGCCAATATCCAGAAGCTTTACAGCAAAATATAGTGCAGGGCAGTGTTGTAATCTGCACCTTTTCAGGAGGCTTCTACAATGGGACCTCTACTCTCACTGCCATTATCGACACAGCCAAAGTACTAGGATTCAGAGGTTTCATTCTTGCTGCAAACCCAGATTATGGTGACTTTATTGCGCAGCCTATTCCCTTTGCCGTTCCTGGCATTATGATACCATCCTCAGCTGACGCTCAGGTTATCTCAACATATTATGAGCAACAAACAGAGAGGAACGAAAGAGGACTTGCCACTAAATTTAGTGCCAAAGCAGCTATAGGAGAGGGAAGAGTTGCTTCTTTCACAGGGCGAGCACCCATCGTCAGCAGATTTTCTTCAAGAGGACCAGATATCATTGATGCTAATAGGACTCTTGCTGATGTACTTAAGCCTGATATTCTTGCACCAGGGAATCAAATTTGGGCTGCATGGAGTCCCATGAGCGCATCAGAACCTATCTTGGCAGGACATAATTTTGCATTATTATCTGGTACTAGCATGGCAACGCCTCATGTTGCAGGCATTGCAGCACTTGTAAAACAATGTCATCCATTTTGGTCTCCATCCATGATTGCATCTTCAATCTCCACAACAGCAACTAAATATGACAATTATGGAGAGCTTATAATGGCAGAATCATTTGGCATCAATAGCTCTTTCCCCTCCACTCCTTTTGACATTGGGGCTGGTCTTGTAAGTCCTTCCTATGCCATTGATCCAGGGTTAGTCCTTCCATCAGGATATGACGATTACATCAACTTCTTGTGCTCTTTGCCTGACATCAATCCGGCTATAGTAACAGCAACAACAGGAGGACTCTGCAGTCACCCGCTTGCCCATCCATCCGATCTAAATCTCCCTTCACTAACAATATCAGTACTGAAGGGGTCCATTTCAGTAAGAAGGAGTTTCATGAATGTAGGACATAAGCCAGAGACATTCTTGTGTTCTGTCATACCTCCAAATGGAACTGCTGTCAAACTTTATCCACCTTGGTTTACCATACAACCCCAGAAAATCCAAGATTTAGAAATAAGATTCTATGTGATGCAGCCAATGGATGGTTTCTGCTTTGGTGAAATTGTGCTGACAGGGAATTTGAATCACATTGTAAGAATACCCTTGTCAGTTTTCCCAGTTTCTGTCTGA	2298	0.4417	MAQGCLLPSPKRESSITDGPNTLYILASSFKMFPLIFIHVSVVLPSSSVFLHHARKLKDTPGVKLVEKDRGARLMTTYTPEFLGLPNGTWTQEGGDRNAGDGVVIGFIDSGINPQHPSFAYDPTNPFTSNLSHFTGACETGPKFPATSCNGKIVSARYFSAGAQAVAVLNSSLDVLSPFDEDGHGSHVASTAAGNARVPVVVDGFFYGQASGMAPRARIAVYKAIYPTVGTLADVVAAIDQAILDGVDILTLSVGPNEPPEGALTFLNIFDISLLFARRAGVFVVQAAGNKGPASSSVVSFSPWAMGVAASSTDRTYPGSLLLGNGQRISGVGMSGPTFGEDFFMYELVSAKDAIKTNGTFPTTPQYVEECQYPEALQQNIVQGSVVICTFSGGFYNGTSTLTAIIDTAKVLGFRGFILAANPDYGDFIAQPIPFAVPGIMIPSSADAQVISTYYEQQTERNERGLATKFSAKAAIGEGRVASFTGRAPIVSRFSSRGPDIIDANRTLADVLKPDILAPGNQIWAAWSPMSASEPILAGHNFALLSGTSMATPHVAGIAALVKQCHPFWSPSMIASSISTTATKYDNYGELIMAESFGINSSFPSTPFDIGAGLVSPSYAIDPGLVLPSGYDDYINFLCSLPDINPAIVTATTGGLCSHPLAHPSDLNLPSLTISVLKGSISVRRSFMNVGHKPETFLCSVIPPNGTAVKLYPPWFTIQPQKIQDLEIRFYVMQPMDGFCFGEIVLTGNLNHIVRIPLSVFPVSV*	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g00263	765	ProSitePatterns	Serine proteases, subtilase family, serine active site.	547	557	IPR023828	-
	Pte5g00263	765	Gene3D	-	638	761	-	-
	Pte5g00263	765	CDD	Peptidases_S8_3	74	583	IPR034197	-
	Pte5g00263	765	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	105	116	IPR023827	-
	Pte5g00263	765	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	55	759	IPR045051	-
	Pte5g00263	765	PRINTS	Subtilisin serine protease family (S8) signature	180	193	IPR015500	-
	Pte5g00263	765	PRINTS	Subtilisin serine protease family (S8) signature	546	562	IPR015500	-
	Pte5g00263	765	PRINTS	Subtilisin serine protease family (S8) signature	100	119	IPR015500	-
	Pte5g00263	765	SUPERFAMILY	Subtilisin-like	74	625	IPR036852	GO:0004252\|GO:0006508
	Pte5g00263	765	CDD	PA_subtilisin_like	320	455	-	-
	Pte5g00263	765	Pfam	Fibronectin type-III domain	666	760	IPR041469	-
	Pte5g00263	765	Gene3D	-	314	484	-	-
	Pte5g00263	765	ProSiteProfiles	Serine proteases, subtilase domain profile.	80	621	-	-
	Pte5g00263	765	Pfam	Subtilase family	100	597	IPR000209	GO:0006508\|GO:0008236
	Pte5g00263	765	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	184	194	IPR022398	-
	Pte5g00263	765	Gene3D	Peptidase S8/S53 domain	102	634	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte5g00263	Pte-Chr5	2566175	2570898	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g00263	53	760	Subtilisin-like Serine Gene Family	AT1G62340	63.217	0.0	924

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g00263	-		-	cave:132171623	1080.86