Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00262 ATGACAATGGCCGACAACCGTCTAGCTTTTTCTCTTTTGTACTATGAGTTGCAGCAAATGGCTTTAATGATCTTTGTTGCTCTGCCTCTTGTCCTTGCAAATACTGACTCTTCCGATGCTGAAGCACTTCGGGTTATGTATACGGCGTTAAACAGTCCATCTGAGCTAACTGGTTGGAAAAGCAGTGGAGGTGATCCATGTAGAGAGTCTTGGAGAGGGGTGACATGTGAGGGTTCATCCGTTATATCCATTGAGGTTTCAGGCTTGGGACTTCATGGTACAATAGGATATCGGCTTTCGGACCTTATCTCTTTGAGAACACTTGACTTAAGCAACAATGATATCCATGATACTATTCCCTATCAATTGCCTCCGAATCTTACTAGCCTGAACCTTGCTGGTAACAACTTAAGTGGAAATCTACCATATTCAATTTCTTCAATGACAGCTTTAAATTATATGAATTTGAGTCGTAATGTGCTTTCCCAACCGATAGGGGATATATTCACTCATCTTGCTGCACTTGGAACCCTGGATTTGTCTTTCAATAACTTATCTGGAGATCTTCCTAATTCCTTTAGTTCATTATCCAACCTTTCTTCTCTATATTTACAGAACAATCAGTTGACGGGTTCTCTTAATGTTCTTGTTCACTTGCCTTTGGATACTTTAAATATTGCAAACAATCGCTTCATTGGATGGATACCTCATGAGCTGAGCTCAGTTCGCAATTTCATATCTGATGGAAATCCATTTGACAACGGTCCTGCTCCTCCTTCGCCACCACATACTTCACCTCCTCCTAGTAGATCTCATGTTAGACACAATAATTCTGGATCTGGCATGCATACACCACGGAGTTCTGGTGATAAAGGTTCTCATAAGGACAACGGTTTGACTGTCGGGGCTATTGTAGGTGTTGCTTTGGGTTCAGTGGTTGCAGCTCTGATTGTGCTTCTTGCTCTTGTTTTCTGTGTTCGGAAGAGTAAACTTAAAGAAGGTGACACAATTGCTTCTAGGAATGCTGTCTCAGTTGGAACAAACCATGCAACTTCTGAGTTGCAAGAGCAGAGAGCAAAGAGTGCCGCTGTAATAGCAGATCTTAAACCTCCCCCAGCAGAGAAATTGATGGTTGAGAGGGTTCAGGTGAAAAATGGATCTTTGAAGAGGATGAAGTCCCCAATAACTGCTACTTCATATACAGTTGCTAATCTCCAGAGTGCAACAAATAGTTTCAGTCAAGAATTTATCATTGGTGAGGGTACCCTTGGTCGAGTTTATAAAGCAGATTTTCCTAATGGGAAGGTCATGGCCATAAAGAAAATCGACAATGCAGCACTATCTCTACTAGAGGAAGATCATTTTCTTGAAGCCATTTCAAATATGTCACGGCTACGACACCCGAATATTGTTACATTGGCCGGTTATTGCGCTGAACATGGGCAACGCCTTTTAGTTTATGAGTACATAGGAAATGGAAATTTACATGATATGCTCCATTTTGCTCATGATAGCAGTAAAGATCTGTCTTGGAATGCCCGTGTACGAATTGCACTTGGCACTGCTCGAGCTTTAGAGTACTTGCATGAAGTATGCCTTCCTTCTGTTGTGCATAGGAATTTCAAGTCAGCAAATATTTTACTTGATGAAGATCTCAATCCACATTTATCTGACTGTGGCTTAGCTGCTTTAACACCAAATACAGAGCGGCAGGTTTCTACTCAAATGGTTGGCTCATTTGGCTACAGCGCTCCAGAGTTTACCTTGTCAGGGATATACACTGTAAAAAGTGATGTTTACAGTTTTGGTGTGGTGATGCTGGAGCTATTGACCGGTAGGAAGCCTCTTGATAGTTCGAGGGTTAGATCAGAACAATCACTAGTAAGATGGGCTACCCCGCAGTTGCATGATATAGATGCATTGTCCAAAATGGTTGATCCTGCTCTTAATGGCATGTATCCTGCAAAATCTCTCTCGCGTTTTGCTGACATCATTGCACTGTGTGTTCAGCTGGAACCTGAGTTTCGACCCCCCATGTCTGAAGTTGTGCAAGCATTGGTGAGACTGGTGCAAAGAGCAAGTGTTGTCAAAAGGCGTCCTAGTGATGATTCTGGTTTTGCTTATAGGAACCCTGATCATGAATCCATAGAGATGTCATTTTGA 2163 0.4216 MTMADNRLAFSLLYYELQQMALMIFVALPLVLANTDSSDAEALRVMYTALNSPSELTGWKSSGGDPCRESWRGVTCEGSSVISIEVSGLGLHGTIGYRLSDLISLRTLDLSNNDIHDTIPYQLPPNLTSLNLAGNNLSGNLPYSISSMTALNYMNLSRNVLSQPIGDIFTHLAALGTLDLSFNNLSGDLPNSFSSLSNLSSLYLQNNQLTGSLNVLVHLPLDTLNIANNRFIGWIPHELSSVRNFISDGNPFDNGPAPPSPPHTSPPPSRSHVRHNNSGSGMHTPRSSGDKGSHKDNGLTVGAIVGVALGSVVAALIVLLALVFCVRKSKLKEGDTIASRNAVSVGTNHATSELQEQRAKSAAVIADLKPPPAEKLMVERVQVKNGSLKRMKSPITATSYTVANLQSATNSFSQEFIIGEGTLGRVYKADFPNGKVMAIKKIDNAALSLLEEDHFLEAISNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAHDSSKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEDLNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFTLSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALSKMVDPALNGMYPAKSLSRFADIIALCVQLEPEFRPPMSEVVQALVRLVQRASVVKRRPSDDSGFAYRNPDHESIEMSF* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00262 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 36 263 - -
Pte5g00262 720 ProSiteProfiles Protein kinase domain profile. 412 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00262 720 SMART LRR_typ_2 172 195 IPR003591 -
Pte5g00262 720 SMART LRR_typ_2 102 130 IPR003591 -
Pte5g00262 720 SMART LRR_typ_2 196 219 IPR003591 -
Pte5g00262 720 MobiDBLite consensus disorder prediction 254 268 - -
Pte5g00262 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 489 - -
Pte5g00262 720 Gene3D Transferase(Phosphotransferase) domain 1 490 710 - -
Pte5g00262 720 CDD STKc_IRAK 418 689 - -
Pte5g00262 720 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Pte5g00262 720 MobiDBLite consensus disorder prediction 269 287 - -
Pte5g00262 720 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Pte5g00262 720 SUPERFAMILY L domain-like 43 244 - -
Pte5g00262 720 MobiDBLite consensus disorder prediction 701 720 - -
Pte5g00262 720 SUPERFAMILY Protein kinase-like (PK-like) 391 686 IPR011009 -
Pte5g00262 720 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Pte5g00262 720 Gene3D Ribonuclease Inhibitor 36 261 IPR032675 -
Pte5g00262 720 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Pte5g00262 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 690 IPR046959 -
Pte5g00262 720 MobiDBLite consensus disorder prediction 250 294 - -
Pte5g00262 720 Pfam Protein kinase domain 415 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00262 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 490 700 - -
Pte5g00262 720 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00262 Pte-Chr5 2558773 2564293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00262 148 721 Strubbelig Receptor Gene Family AT4G22130 69.965 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte5g00262 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00262 - - qsa:O6P43_031282 1067.76