Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00259 ATGATAACAAAGCAGAAGAGGATAGCTCCATCAAGAAACTTCTTGGCCTTTCTTGTTTTGATTATCTCTTCAATTCTCAAGGTTGAAGCCAAGTGCAAGTCTGGCTGCAACCTTGCTTTGGCTTCATATTACATCTGGAAAGGGTCAAATCTAAGTTATATTAGCAGCTTATTTGGTCAACAAGTATCTGATATCCTAAAATACAACCTTAATGTTCCAAACCAAGATCACATACTGACCGATACGCGAATCAACGTGCCTTTCTCGTGTGAATGTTTGAATGGTGACTTCCTCAGCCATACTTTCTCTTACACATTTCAACCTGATGATACCTATGGAAAAATTGCTATGCTTGCTTTCTCTAATCTGACTACTGAGAATTGGATGCGAAGAGTGAACACATATTTACCTACTCAGATACCAAATTATGTTCCGGTTAATGTCACAGTTAATTGTTCTTGTGGTGATAAACGTGTATCGAAAGATTACAGTTTGTTTTCTACATATCCACTTCGTCCCGGCGATAACTTGTCGTCTATCGCTGCGGAGGCCGGTGTACCAGAAGTGTTGTTGGAGAGTTACAACCCAGGATCCAATTTTAGTGCAGAGTCTGGCCTTGTCTTTGTCCCAGCCAAAGATCAATCTGGAAATTTCCCACCACTGAAGTTAAGCTCAGGTTCTGGAAACACAGAAAAGACAACAAAATCAATCAGTGTGACGCATCAAGCACTGACAGGTATCACCGTGGACAAGTCAGTGGAGTTTTCTTATGAAGAGCTTGCTCAAGCTACAGATGACTTTAGCGAATCCAATAAAATTGGACAAGGGGGTTTTGGATACGTTTACTTTGCTGAGCTTAGAGGCGAGAAAGCTGCAATTAAGAAGATGGACATGCAGGCATCAAAGGAGTTCCTTGCTGAACTCAAAGTTTTAACACATGTTCATCATTTGAATCTGGTACGCTTAATAGGCTATTGTGTTGAAGGTTCATTGTTTTTGGTTTACGAGTACGTTGAGAATGGAAACTTAGCACAACATCTACGCAGCTCAGATATGGAACCTTTGTCTTGGTCTGGAAGAGTTCAAATTGCCTTGGATGCAGCTAGAGGATTAGAATATATCCATGAACATACAGTTCCTGTATACATACATCGTGATATCAAGTCTGCTAATATTTTGATAGATAAAAAATTCCGTGCTAAGGTTGCAGATTTTGGTCTGACTAAACTGACTGAATATGGAAGTTCTTCGCAGCACACTCGCCTTGTAGGTACTTTTGGATATATGCCCCCAGAGTATGCACGTTATGGCGATGTTTCCCCCAAGATAGATGTGTATGCTTTTGGAATTGTTCTGTATGAGCTCATATCTGGGATGGCAGCAATTGTGAAGACAAACGAGTTTGTGGCCAAATCAAAAGGACTAGTTGCTCTGTTTGAAGACGTTTTACACCAGCCTGATCCTAGAGAAGACCTACGGAAACTGGTTGACAGAAAGCTTGGTGACAACTACAATATTGATGCAGTATACAAAATGTCTCAGCTTGCCAAAGCTTGTACGCAAGAAAATCCTCAACTTAGGCCAAGCATGAGGTCGATTGTAGTTGCATTGATTACACTTTCATCTTCATCCGAGGAATGGGATGTGGGTACCTTCTATGAAAGTCATGGTGTAGTCAATCTCACGTCAGGGAGATAG 1698 0.4099 MITKQKRIAPSRNFLAFLVLIISSILKVEAKCKSGCNLALASYYIWKGSNLSYISSLFGQQVSDILKYNLNVPNQDHILTDTRINVPFSCECLNGDFLSHTFSYTFQPDDTYGKIAMLAFSNLTTENWMRRVNTYLPTQIPNYVPVNVTVNCSCGDKRVSKDYSLFSTYPLRPGDNLSSIAAEAGVPEVLLESYNPGSNFSAESGLVFVPAKDQSGNFPPLKLSSGSGNTEKTTKSISVTHQALTGITVDKSVEFSYEELAQATDDFSESNKIGQGGFGYVYFAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYVENGNLAQHLRSSDMEPLSWSGRVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKKFRAKVADFGLTKLTEYGSSSQHTRLVGTFGYMPPEYARYGDVSPKIDVYAFGIVLYELISGMAAIVKTNEFVAKSKGLVALFEDVLHQPDPREDLRKLVDRKLGDNYNIDAVYKMSQLAKACTQENPQLRPSMRSIVVALITLSSSSEEWDVGTFYESHGVVNLTSGR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00259 565 ProSiteProfiles LysM domain profile. 41 86 IPR018392 -
Pte5g00259 565 SUPERFAMILY Protein kinase-like (PK-like) 248 537 IPR011009 -
Pte5g00259 565 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Pte5g00259 565 FunFam PTI1-like tyrosine-protein kinase 3 338 551 - -
Pte5g00259 565 Gene3D Phosphorylase Kinase; domain 1 237 337 - -
Pte5g00259 565 Gene3D Transferase(Phosphotransferase) domain 1 338 554 - -
Pte5g00259 565 FunFam LysM receptor kinase 2 246 337 - -
Pte5g00259 565 Pfam Protein tyrosine and serine/threonine kinase 270 536 IPR001245 GO:0004672|GO:0006468
Pte5g00259 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Pte5g00259 565 Pfam LysM domain 47 87 IPR018392 -
Pte5g00259 565 SMART serkin_6 267 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00259 565 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 229 550 IPR044812 GO:0019199|GO:0045087
Pte5g00259 565 CDD LysM 168 199 IPR018392 -
Pte5g00259 565 ProSiteProfiles Protein kinase domain profile. 267 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00259 Pte-Chr5 2536933 2541236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00259 13 566 Receptor kinase-like Gene Family AT3G21630 54.221 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte5g00259 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00259 - K13429 mesc:110604637 817.379