Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00256 ATGGAAACTCATCTCCAGGTATCCAGAGATGTCGGAAGAAGAAATAGCAGAGTGCTGCCCCTTTTGCCGCCAGAACTGCAGTCGGAAGAAGAAATAGCAGAGTGCTGCCCCTTTTGCCGCCAGAACTGCAATTGCAATGCATGCTTGCTTTCAAGTGGGGTGATCAAGACATCTAAAAGGGCCATATCAAATAAGGAAAGGATGGAGTATCTATTGCATTTAATTGAATTACTGCTTCCTCATGTGAAGCAAATCTATAGAGAACACAATCAGGAGTTGGAAATTGAAACTAAAATACAAGGTAAACTACCTTCTGAGATTGAGATGCAACAGGCTCTTTGCTGCAATGACGAGCGTGTTTTCTGTGACCATTGTGGAACATCAATTCTTGACCTTCATCGAAGCTGCAGCAACTGTTCATATGAGCTATGCATCAATTGCTGTCATGAGATTCGTGAGGGAAGAATTTCAAGTCGTGCTCCAGTACAATTTCTATATGTTAATAGAGGATATGATTACATGCATGGTGGAGAGCCCTTATCTCAACCATCCGATTTGGAGATCTTAGAAAATGATGTGGACATTTCTGAGCAGTGGATATCCAAGGATGGGAAAATATTATGTGCTCCAACAAATTTGGGAGGTTGTGGTGATTCTGTTCTGGAGCTCAAGTGCATCCTTCCACGAGGATGGATAAATGACTTGGAAGCTAAAGCACGTGACTTATTAGTAATTTACAAAACTGACCAAAGGGCTCAGCAGCAGGAAGCTATATCTCCAAGCACAGAATGCTCTCAAAAAGCATGGTATAAGGAAGACTCTAATGGCAACTACATATATAGTCCAGCGTCAAGTGACAACAACAAAGAAGTATTTACCAGGTTCCAAAGACATTGGCGAAATGGTGAACCAATCATAGTTCGTGATGTTCTGGAAGAAGCAACTGGTTTAAGCTGGGAGCCAATGGTCATGTGGCGGGCTTTATGTGAAAACTGGGATACTGAGATCAGCTCAAAAATGTCTGAAGTGAAAGCCATTGATTGTTTAGCTGGTTGTGAGGTAGAAATTAACTCTCGCAAGTTCTTTAAAGGTTATACAGAAGGGAGAACCTATCTCAATCTATGGCCAGAAATGCTCAAGTTAAAGGACTGGCCTCCTTCTGACAAATTTGAGGATCTTTTGCCCCGTCACTGTGATGAATTTATTTGTGCCTTGCCTTTTCAAGAGTACACTGATCCTCGTGCTGGAATACTCAACCTTGCCGTTAAGCTGCCTCCAACTATGTTGAAGCCCGATATGGGTCCGAAAACATACATTGCTTATGGAGTTAAAGAAGAGCTTGGGAGAGGGGATTCTGTGACAAAACTTCACTGTGATATGTCAGATGCGGTTAATATTTTAACCCATACAGCTGAAGTAGAGTTAAGTGATGAGCACAGGTCTGCCATTTCGAGGTTAAAAGAAGCACATAAGGCCCAAGACGCGAGAGAGCGATCTATTCAAGGGATGAAAAGTTGTGAGCATCTGACTGAAGAAGCTTATGAAAACAATAGAAACAATGACGTTATGGAAGTTTCAGATACCACAAATACAGGAGAGTATCCTGCAGCTGAAGAAATTGCTTGTGCGACCATGTCCTCAAAACAAGAGAATGGTGAAACAGGCGATGCTCTTTGGGATATCTTTCGGAGAGAGGACTATCCAAAGTTAGAAGCATATTTAATAAAGCACTCGAAAGAATTTAGGCACACTTACTGTTCACCAGTTGAACAGGTCATTCATCCGATTCATGACCAGTGTTTTTATTTAACTAATGAGCACATGAAGAAGCTGAAGGAGGAATTTGGAGTCGAGCCATGGACTTTTGAACAAAGACTTGGGGAGGCAGTATTTATCCCTGCTGGATGCCCACATCAAGTTAGGAATCTCAAGTCTTGTACAAAAGTAGCGGTGGATTTCGTGTCCCCTGAGAATGTCAGTGAGTGCTTGCGCCTAACTGATGAGTTCCGGATGCTACCCAAAAACCATAGAGCCAGAGAAGACAAACTCGAGATAAAGAAGATGATAGTCTATGCAGTTGCTGAAGCTATTAATGAACTAGAGGCCCTAAGCAACTCGAGCCTCGTTACCTCTTGA 2136 0.4237 METHLQVSRDVGRRNSRVLPLLPPELQSEEEIAECCPFCRQNCNCNACLLSSGVIKTSKRAISNKERMEYLLHLIELLLPHVKQIYREHNQELEIETKIQGKLPSEIEMQQALCCNDERVFCDHCGTSILDLHRSCSNCSYELCINCCHEIREGRISSRAPVQFLYVNRGYDYMHGGEPLSQPSDLEILENDVDISEQWISKDGKILCAPTNLGGCGDSVLELKCILPRGWINDLEAKARDLLVIYKTDQRAQQQEAISPSTECSQKAWYKEDSNGNYIYSPASSDNNKEVFTRFQRHWRNGEPIIVRDVLEEATGLSWEPMVMWRALCENWDTEISSKMSEVKAIDCLAGCEVEINSRKFFKGYTEGRTYLNLWPEMLKLKDWPPSDKFEDLLPRHCDEFICALPFQEYTDPRAGILNLAVKLPPTMLKPDMGPKTYIAYGVKEELGRGDSVTKLHCDMSDAVNILTHTAEVELSDEHRSAISRLKEAHKAQDARERSIQGMKSCEHLTEEAYENNRNNDVMEVSDTTNTGEYPAAEEIACATMSSKQENGETGDALWDIFRREDYPKLEAYLIKHSKEFRHTYCSPVEQVIHPIHDQCFYLTNEHMKKLKEEFGVEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVSECLRLTDEFRMLPKNHRAREDKLEIKKMIVYAVAEAINELEALSNSSLVTS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00256 711 SMART cupin_9 394 670 IPR003347 -
Pte5g00256 711 Gene3D Cupin 280 679 - -
Pte5g00256 711 Pfam JmjC domain, hydroxylase 548 653 IPR003347 -
Pte5g00256 711 ProSiteProfiles JmjC domain profile. 413 670 IPR003347 -
Pte5g00256 711 SUPERFAMILY Clavaminate synthase-like 291 693 - -
Pte5g00256 711 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 28 705 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00256 Pte-Chr5 2515177 2519719 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte5g00256 JmjC 2.3e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00256 K15601 K21989 cave:132171027 924.08