Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00252 ATGGACAAAGCTCGATGGGGTCTCACACTTGATCCTTCAAACCAATCTGTTATCAATTCATTTCCAAAGCCAAAACAAGAAACCATGTTCACGGGCACTACTATTGCTGATTTTCCGGTGAGCTGTAGAGAGCAACAGACTCGTGCTGCATCTTCTTGCTCCCTTGACGATCGGGTGGTTCTCGGTGAGGTTGACTTCTTCGCTGATCAGCACAAGCTCTCTCTGTCATCCACTTCTGATGATGATCACCGTGTTGAGATCCAAACCACTGTCAAGAAGGAGAACAACTATCTTGACAACTCTGACTTAAATGTCAATACGGGGTTGCAGCTTGTCATATCTAATACTGGAAGTGATCAATCAACTGTTGAAGACGGAGGCTCATCAGACACGGAAGATAAACGAGCCAGAACAGCTGAGCTGGCGAAACTGCAAATGGAGCTGCAGCGTATAAACGTTGAAAATCAAAAGCTGAAGGAGATGCTTAGTCAAGTGAACTACAACTACAATGCGTTACAAATGCAGCTTGTAACATTGATGCAGCAGCAGCAGAATCATCAACAACACGAGGTTGCTAACAAAGCGATGAAGCAAGAAGGAGTTCCCAGACAGGTTCTATTTGATCTACGTCCGAGTGGGACGACAGCTGACAGTGATGATCGTGAGACATCTGATACTTCATCAGACGAAAGAACTCGTTCGGCTACACCTCGTACTGACCATACCGAGGTTGCAAGAAACAATAGTACAAAAAAGGAGGTTACTAGGGAATATAGCCCAGATTCTGAATCACATGGCTGGGTCCCCAACAAGGTCCAGCAATTGAACAATGCTTCCAAGGCTATTGAACAACATACTGAAGCCATCATGAGGAAAGCCCGTGTGTCTGTCCGTGCTCAATCAGAAGCTCCCATGATTAGTGATGGATGTCAATGGCGAAAGTATGGACAGAAAATGGCTAAAGGAAATCCATGCCCTCGTGCATATTACAGATGCACCATGGCAGCTGGTTGTCCAGTTCGCAAACAAGTTCAACGGTGTGCAGAGGACAAGAAGATTCTAATCACAACTTATGAAGGAAATCACAGCCATCCACTGCCCCCTGCTGCGGTGGCCATGGCATCAACCACAACGGCAGCTGCTAATATGTTGTTGTCAGGGTCCATGTCTAGTGCTGATGGGTTACCCATGAACCCCAATTTACTAGCAAGGGCAATTCTTCCTTGCTCATCAAGTATGGCAACCATTTCAGCTTCTGCACCGTTCCCTACTGTGACGTTAGACCTCACCCAAAACTCAAACAACCCAGCATCACAGTTTCAAAGACCTACAGTCCCATTTCAGGTGCCCTTCATGGGACAACCTCAAAACTATGTATCGGGACCAACAAATAATGCACTGCCTCAGCCTCTAGTTCAAGCGCTCTACAATCAGTCTAAATTTTCAGGGCTTCAGTTATCCCAAGACATGGGGTCTTCCAAAGGAGCTCACCAACTTCCACAACTACCCTTTCAGCAAAACCAGCAGCCACCATTGAATGACACATTGAGTGCTGCAACTGCAGCCATCACTGCTGATCCAAACTTCACTGCAGCACTTGCAGCCGCTATCTCTTCCATCATTAGCGGTTCTCATACAAACAATAGTGGCAACGCCCAGAATAACAACATCCAGCAACATCATTCGCAGCAGCAGCAGAAATAA 1704 0.4636 MDKARWGLTLDPSNQSVINSFPKPKQETMFTGTTIADFPVSCREQQTRAASSCSLDDRVVLGEVDFFADQHKLSLSSTSDDDHRVEIQTTVKKENNYLDNSDLNVNTGLQLVISNTGSDQSTVEDGGSSDTEDKRARTAELAKLQMELQRINVENQKLKEMLSQVNYNYNALQMQLVTLMQQQQNHQQHEVANKAMKQEGVPRQVLFDLRPSGTTADSDDRETSDTSSDERTRSATPRTDHTEVARNNSTKKEVTREYSPDSESHGWVPNKVQQLNNASKAIEQHTEAIMRKARVSVRAQSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKKILITTYEGNHSHPLPPAAVAMASTTTAAANMLLSGSMSSADGLPMNPNLLARAILPCSSSMATISASAPFPTVTLDLTQNSNNPASQFQRPTVPFQVPFMGQPQNYVSGPTNNALPQPLVQALYNQSKFSGLQLSQDMGSSKGAHQLPQLPFQQNQQPPLNDTLSAATAAITADPNFTAALAAAISSIISGSHTNNSGNAQNNNIQQHHSQQQQK* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00252 567 Gene3D WRKY domain 291 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00252 567 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 104 554 IPR044810 GO:0003700
Pte5g00252 567 Pfam WRKY DNA -binding domain 308 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00252 567 FunFam probable WRKY transcription factor 31 291 368 - -
Pte5g00252 567 MobiDBLite consensus disorder prediction 546 567 - -
Pte5g00252 567 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00252 567 MobiDBLite consensus disorder prediction 214 260 - -
Pte5g00252 567 SUPERFAMILY WRKY DNA-binding domain 300 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte5g00252 567 Coils Coil 134 175 - -
Pte5g00252 567 Coils Coil 179 199 - -
Pte5g00252 567 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte5g00252 567 MobiDBLite consensus disorder prediction 208 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00252 Pte-Chr5 2484570 2487886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00252 1 554 WRKY Transcription Factor Family AT1G62300 50.250 9.22e-148 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte5g00252 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00252 - - ccaj:109803638 558.14