Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00218 ATGGGGACTTATGTCTACTGTGCACCTGAGTATGTTTTAACAGGAAAGCTAACCACAAAGTCAGATGTCTACAGTTTTGGTTTGGTGTTTCTAGAGTTGATCACTGGGAGGCGCGCAATAGACAAATCTAGGGTCACAGAAGAGCAGAACTTGATAGATTGGATGGCTGATCGATTACTAGATGGAAAATACCACGAAAAGGGTGTTTTCAAAGCTCTTGCAATTGCAGCTATGTGTCTACAAGAGGATCCAGACCCCCGACCTTCAATGGCAGATGTTGTAACAGCTCTTGAGCTTCTTTATGATGAACTGAGTGAAGATGAAAGTGGTGACGGAGAAAGTGTTGAATTAGTGAAAGCCACGAGTAAAAAAGATAGTCGAGAGGCATAG 390 0.4282 MGTYVYCAPEYVLTGKLTTKSDVYSFGLVFLELITGRRAIDKSRVTEEQNLIDWMADRLLDGKYHEKGVFKALAIAAMCLQEDPDPRPSMADVVTALELLYDELSEDESGDGESVELVKATSKKDSREA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00218 129 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00218 129 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Pte5g00218 129 MobiDBLite consensus disorder prediction 112 129 - -
Pte5g00218 129 Pfam Protein tyrosine and serine/threonine kinase 5 97 IPR001245 GO:0004672|GO:0006468
Pte5g00218 129 SUPERFAMILY Protein kinase-like (PK-like) 1 103 IPR011009 -
Pte5g00218 129 MobiDBLite consensus disorder prediction 105 129 - -
Pte5g00218 129 PANTHER OS07G0668900 PROTEIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00218 Pte-Chr5 2250275 2258570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00218 1 100 Glycoside Hydrolase AT3G07070 57.522 6.75e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte5g00218 PK_Tyr_Ser-Thr 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00218 - - cpap:110810932 142.51