LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g00211	ATGGCAACTGGCCGTCAGCCTCTGCTTCAAACTCTGAAGAGTTCAAGCTCTCATCGCAAGACTGTTTGTCTAATTATCTCTTTCATTGCTATCATAGGCTCAACAGCTCTAATTGCACCTCACTTGACTGAACCCAACACTTCCAATCTCTCTCTTCCTAAACAAATCTGTGAAAATGCTTCTGAAAGAGAATCATGCCTTGCCCTTGTCTCAGAACTTGTCCTAGAAACACCTTTCCAGACCAAAGATCTAGTCAGTTTACTTCAATTTTTTCTCCGGCAAACGACACAACACATTCAAATAGCCATACAGACAACCAATGATATCAAGCATCGGATCAATGACCCAAAAGAACAAGCAGCATTGCATGACTGTGAAGAGCTTCTTGATTTGTCCATGGACAGAGTTTTGGATTCAATTGTAGCTCTAAGAAATGAAAGCACCAAGTCCTACCAAGATAAACATGCATGGTTAAGTGCTATACTCACTAACCATGTCACTTGTTTAGATGAACTGACAGGCTCAGCACTTGTATTCATGGAGACTCGTATCAAACACCTGATATCTAGAGCTAGAACCTCCCTAGCCATGTTTGTTGCAATTTCACCTCCAAAAGCTGACATAGTCATTGACACCTTCAATGTGGACTTGCCATCTTGGATGACAAGAAAAGACAGAAAACTTCTACAATTGTCTGCGAAGGACATCAAAGCCGATGTTGTTGTGGCTAAGGATGGGAGTGGAAAATTCAAGACAGTACAAGAGGCAGCAGACTTTGCTCCCAACAAAAGTAGCTCAAGATTCATCATCTACGTTAAGAAGGGGACATACAAGGAAAATGTCAGCATAAGCAAGAAAAAGAAAAATCTGATGCTCGTCGGTGATGGCATGGATTCAACTGTTATCACCGGAAGCCTGAATGTGGTAGACGGTTCTACAACTTTCCGATCAGCCACCGTTGCTGCTGTTGGAGATGGATTCATAGCACAGGATATATGGTTCCAAAACACAGCAGGGCCGGAGAAACATCAAGCAGTGGCACTGCGTGTCGGTGCCGATCAATCCGTCATCAACCGCTGCCGGGTTGACGCCTTTCAAGACACCCTGTTTGCTCATTCCAATCGCCAATTCTACCGTGACTCCTTCATTGCCGGCACTATAGACTTCATCTTTGGCAATGCAGCAGCAGTTCTTCAAAACTGTACCCTTGAGGCAAAAAAGCCAATGAGCCAACAGAACAACATGGTAACGGCCCAAGGTCGTATAGACCCAAACCAAAACACAGGGACATCTATCCAATACTGTAACATAATAGCCGGCTCAGATCTCGAACCTGTGAAAGGCACAATCCGAAGTTATCTGGGCCGTCCATGGAAGAGCTATTCTAGGACTGTGGTTATGGAATCTACAATTGATGACCACATTGATCCAGCAGGATGGTCACCATGGAGTGGGGATTTTGCACTGAAGACATTGTATTATGGAGAGTATATGAATAGTGGTCCAGGTGCTGGAACTAGCAAGAGAGTGAACTGGACTGGTTACCATGTCATCACTGACCCACAAGAAGCCAGCAAGTTCACTGTCGCAGAGCTCATTCAAGGAGGGGAATGGTTGGGATCCACTGGGGTAGCTTTTACAGAGGGACTGTAA	1653	0.4471	MATGRQPLLQTLKSSSSHRKTVCLIISFIAIIGSTALIAPHLTEPNTSNLSLPKQICENASERESCLALVSELVLETPFQTKDLVSLLQFFLRQTTQHIQIAIQTTNDIKHRINDPKEQAALHDCEELLDLSMDRVLDSIVALRNESTKSYQDKHAWLSAILTNHVTCLDELTGSALVFMETRIKHLISRARTSLAMFVAISPPKADIVIDTFNVDLPSWMTRKDRKLLQLSAKDIKADVVVAKDGSGKFKTVQEAADFAPNKSSSRFIIYVKKGTYKENVSISKKKKNLMLVGDGMDSTVITGSLNVVDGSTTFRSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGADQSVINRCRVDAFQDTLFAHSNRQFYRDSFIAGTIDFIFGNAAAVLQNCTLEAKKPMSQQNNMVTAQGRIDPNQNTGTSIQYCNIIAGSDLEPVKGTIRSYLGRPWKSYSRTVVMESTIDDHIDPAGWSPWSGDFALKTLYYGEYMNSGPGAGTSKRVNWTGYHVITDPQEASKFTVAELIQGGEWLGSTGVAFTEGL*	551

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g00211	550	Gene3D	-	233	550	IPR012334	-
	Pte5g00211	550	CDD	PMEI-like_4	65	202	-	-
	Pte5g00211	550	FunFam	Pectinesterase	233	550	-	-
	Pte5g00211	550	SMART	PMEI_2	48	197	IPR006501	GO:0004857
	Pte5g00211	550	NCBIfam	pectinesterase inhibitor domain	26	177	IPR006501	GO:0004857
	Pte5g00211	550	ProSitePatterns	Pectinesterase signature 2.	383	392	IPR033131	-
	Pte5g00211	550	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	54	191	IPR035513	-
	Pte5g00211	550	PANTHER	PECTINESTERASE	31	540	-	-
	Pte5g00211	550	Pfam	Pectinesterase	239	535	IPR000070	GO:0030599\|GO:0042545
	Pte5g00211	550	Pfam	Plant invertase/pectin methylesterase inhibitor	52	189	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte5g00211	Pte-Chr5	2200869	2203938	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g00211	1	551	Carbohydrate Esterase	AT1G11580	55.694	0.0	639

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g00211	K01051		-	qsa:O6P43_031215	773.852

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