Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00211 ATGGCAACTGGCCGTCAGCCTCTGCTTCAAACTCTGAAGAGTTCAAGCTCTCATCGCAAGACTGTTTGTCTAATTATCTCTTTCATTGCTATCATAGGCTCAACAGCTCTAATTGCACCTCACTTGACTGAACCCAACACTTCCAATCTCTCTCTTCCTAAACAAATCTGTGAAAATGCTTCTGAAAGAGAATCATGCCTTGCCCTTGTCTCAGAACTTGTCCTAGAAACACCTTTCCAGACCAAAGATCTAGTCAGTTTACTTCAATTTTTTCTCCGGCAAACGACACAACACATTCAAATAGCCATACAGACAACCAATGATATCAAGCATCGGATCAATGACCCAAAAGAACAAGCAGCATTGCATGACTGTGAAGAGCTTCTTGATTTGTCCATGGACAGAGTTTTGGATTCAATTGTAGCTCTAAGAAATGAAAGCACCAAGTCCTACCAAGATAAACATGCATGGTTAAGTGCTATACTCACTAACCATGTCACTTGTTTAGATGAACTGACAGGCTCAGCACTTGTATTCATGGAGACTCGTATCAAACACCTGATATCTAGAGCTAGAACCTCCCTAGCCATGTTTGTTGCAATTTCACCTCCAAAAGCTGACATAGTCATTGACACCTTCAATGTGGACTTGCCATCTTGGATGACAAGAAAAGACAGAAAACTTCTACAATTGTCTGCGAAGGACATCAAAGCCGATGTTGTTGTGGCTAAGGATGGGAGTGGAAAATTCAAGACAGTACAAGAGGCAGCAGACTTTGCTCCCAACAAAAGTAGCTCAAGATTCATCATCTACGTTAAGAAGGGGACATACAAGGAAAATGTCAGCATAAGCAAGAAAAAGAAAAATCTGATGCTCGTCGGTGATGGCATGGATTCAACTGTTATCACCGGAAGCCTGAATGTGGTAGACGGTTCTACAACTTTCCGATCAGCCACCGTTGCTGCTGTTGGAGATGGATTCATAGCACAGGATATATGGTTCCAAAACACAGCAGGGCCGGAGAAACATCAAGCAGTGGCACTGCGTGTCGGTGCCGATCAATCCGTCATCAACCGCTGCCGGGTTGACGCCTTTCAAGACACCCTGTTTGCTCATTCCAATCGCCAATTCTACCGTGACTCCTTCATTGCCGGCACTATAGACTTCATCTTTGGCAATGCAGCAGCAGTTCTTCAAAACTGTACCCTTGAGGCAAAAAAGCCAATGAGCCAACAGAACAACATGGTAACGGCCCAAGGTCGTATAGACCCAAACCAAAACACAGGGACATCTATCCAATACTGTAACATAATAGCCGGCTCAGATCTCGAACCTGTGAAAGGCACAATCCGAAGTTATCTGGGCCGTCCATGGAAGAGCTATTCTAGGACTGTGGTTATGGAATCTACAATTGATGACCACATTGATCCAGCAGGATGGTCACCATGGAGTGGGGATTTTGCACTGAAGACATTGTATTATGGAGAGTATATGAATAGTGGTCCAGGTGCTGGAACTAGCAAGAGAGTGAACTGGACTGGTTACCATGTCATCACTGACCCACAAGAAGCCAGCAAGTTCACTGTCGCAGAGCTCATTCAAGGAGGGGAATGGTTGGGATCCACTGGGGTAGCTTTTACAGAGGGACTGTAA 1653 0.4471 MATGRQPLLQTLKSSSSHRKTVCLIISFIAIIGSTALIAPHLTEPNTSNLSLPKQICENASERESCLALVSELVLETPFQTKDLVSLLQFFLRQTTQHIQIAIQTTNDIKHRINDPKEQAALHDCEELLDLSMDRVLDSIVALRNESTKSYQDKHAWLSAILTNHVTCLDELTGSALVFMETRIKHLISRARTSLAMFVAISPPKADIVIDTFNVDLPSWMTRKDRKLLQLSAKDIKADVVVAKDGSGKFKTVQEAADFAPNKSSSRFIIYVKKGTYKENVSISKKKKNLMLVGDGMDSTVITGSLNVVDGSTTFRSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGADQSVINRCRVDAFQDTLFAHSNRQFYRDSFIAGTIDFIFGNAAAVLQNCTLEAKKPMSQQNNMVTAQGRIDPNQNTGTSIQYCNIIAGSDLEPVKGTIRSYLGRPWKSYSRTVVMESTIDDHIDPAGWSPWSGDFALKTLYYGEYMNSGPGAGTSKRVNWTGYHVITDPQEASKFTVAELIQGGEWLGSTGVAFTEGL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00211 550 Gene3D - 233 550 IPR012334 -
Pte5g00211 550 CDD PMEI-like_4 65 202 - -
Pte5g00211 550 FunFam Pectinesterase 233 550 - -
Pte5g00211 550 SMART PMEI_2 48 197 IPR006501 GO:0004857
Pte5g00211 550 NCBIfam pectinesterase inhibitor domain 26 177 IPR006501 GO:0004857
Pte5g00211 550 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Pte5g00211 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 191 IPR035513 -
Pte5g00211 550 PANTHER PECTINESTERASE 31 540 - -
Pte5g00211 550 Pfam Pectinesterase 239 535 IPR000070 GO:0030599|GO:0042545
Pte5g00211 550 Pfam Plant invertase/pectin methylesterase inhibitor 52 189 IPR006501 GO:0004857
Pte5g00211 550 SUPERFAMILY Pectin lyase-like 237 549 IPR011050 -
Pte5g00211 550 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Pte5g00211 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00211 Pte-Chr5 2200869 2203938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00211 1 551 Carbohydrate Esterase AT1G11580 55.694 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00211 K01051 - qsa:O6P43_031215 773.852