Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00204 ATGGCTGGCCGTCCCAACCCAGAATTCCGCCCGGCCAAGCGACATCATTCCGCCCGATACTTTGCCAGTCGGGTACATGAAAGTCTCACAACCCGCTTGTCCAAAGTCGTGTGTTCCGTCCTCCTGAGTCTTCTCTTCTTTGCTATCATTATAATTTTCATAGTATGGATAAGTCTACGCCCCCACAGGCCTAAAATTTTTATCCATGGCTTTTCAGTTTCGGGTTTGGGTCATGATAATGGGTTTGAGCATACTTGGATAACATTTAATGCCTCAGCCCGAAACCCGAACCTAAACGTCGGGATTTATTATGACTCTCTGGCCGGGTCGGTTTATTACGAGGACAAACAGATTGTGTCCATGCCGTCACTTTTTCCGTTCTATCAAGGGCCTAAAAATACTACGGTGTTGGCAGCTACACGGAGTAGTGGCTTATTGTCTAGGAATAATCACCGTCGGGTGGAGACCGTTAGATTTCGTTTGGATTTGACGGCGACGATTAGATTCAAGATTTCTACGTGGAAGAGCAAGCACCATCAAATGCACGCCAGTTGTGATGTCGTCGTGGGCTCTGATGGAAATATCTTGCCGGTTTATAAGGACAAGAAATGTGCCGTCTATTTCACCTGA 630 0.4683 MAGRPNPEFRPAKRHHSARYFASRVHESLTTRLSKVVCSVLLSLLFFAIIIIFIVWISLRPHRPKIFIHGFSVSGLGHDNGFEHTWITFNASARNPNLNVGIYYDSLAGSVYYEDKQIVSMPSLFPFYQGPKNTTVLAATRSSGLLSRNNHRRVETVRFRLDLTATIRFKISTWKSKHHQMHASCDVVVGSDGNILPVYKDKKCAVYFT* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00204 209 PANTHER OS05G0367900 PROTEIN 35 197 IPR044839 GO:0098542
Pte5g00204 209 Pfam Late embryogenesis abundant protein 91 185 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00204 Pte-Chr5 2149979 2150608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00204 76 171 SNARE and Associated Proteins AT1G32270 30.769 1.82e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00204 - - twl:120006585 241.506