Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00199 ATGTCCCCAGAATATGCAATGCATGGACAATTTTCAATCAAATCAGATGTTTATAGTTTGGGAGTATTGATTTTAGAGATCGTTACTGGCAAGAAGAACTCATCTTTTAGTGAATCTGGAGAAGCTGCAGACCTCCTAAGCTACGCTTGGCAATATTGGAGAGATGGGAGGCCGTTGGAATTGTTGGATTCAGATTTAAGAGATTGTTTTTCACCGGACCAAGTGATGAGATGCATACATATAGGCTTACTCTGTGCGCAGGAAGATCCAAATGAGAGACCTACTATGCAGTCAATACTTCTTATGCTTAACAGTTATTCAATCACTCTAGGAACTCCTCAGAGGCCAGGATTTTACCTACACAGCAGAACGCAACCAAGTTATTCAACAAGCAAAGAGTTTGAGTTAGATAAATCTGCTGTTGGCCAATCTCCACCAGTTTCTGTCAATGAAGCATCCATTAGTGATATAGATCCTCGCTAG 483 0.4079 MSPEYAMHGQFSIKSDVYSLGVLILEIVTGKKNSSFSESGEAADLLSYAWQYWRDGRPLELLDSDLRDCFSPDQVMRCIHIGLLCAQEDPNERPTMQSILLMLNSYSITLGTPQRPGFYLHSRTQPSYSTSKEFELDKSAVGQSPPVSVNEASISDIDPR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00199 160 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00199 160 MobiDBLite consensus disorder prediction 130 160 - -
Pte5g00199 160 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
Pte5g00199 160 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Pte5g00199 160 MobiDBLite consensus disorder prediction 130 151 - -
Pte5g00199 160 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Pte5g00199 160 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 159 - -
Pte5g00199 160 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00199 Pte-Chr5 2126816 2127403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00199 1 161 Receptor kinase-like Gene Family AT4G05200 50.932 7.66e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte5g00199 PK_Tyr_Ser-Thr 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00199 - - pop:18107164 211.46