Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00196 ATGTCTACCCAAGAGTTCTTGCAATTTGATTTACTAACCGTCAGGGAGGCTACAAGTAACTTTGCGATTGACAACAAATTAGGTGAAGGAGGTTTTGGTGAAGTTTACAAGGGTACACTTCCTAATGGACAAGATATAGCTGTGAAGAGGCTTTCAAGAAGTTCAAGACAAGGTGCAGCAGAATTCAAGACAGAAGTTCTTTTGGTAGCCAAACTCCAACACAGGAATCTGGTGAGGTTATTGGGGTTTTGCTTAGAAGGAGAAGAGAAGCTGTTAGTATATGAATTGGTGCCCAACAAAAGTCTGGATCACCTTCTTTTTGACCCAGAAAAACGAGGACTACTGGACTGGTCAATAAGATACAAGATAGTAATAGGAATTGCCCGAGGAATGCTTTATCTTCATGAAGATTCCAGACTTCGAATCATACATCGTGATCTCAAGGCCAGCAATATATTGTTAGATGGGGATCTAAATCCAAAAATTTCTGACTTTGGTATGGCTAAGATCTTTGGTGTGGATCAAACTCAAGCAAATACAAGTAGAATTATGGGAACGCATGGTTACATGTCCCCGGAATATGCAATGCATGGACAATTTTCAATCAAATCAGATGTTTATAGTTTTGGAGTATTGATTTTAGAGATCGTTACTGGCAAGAAGAACTCATCTTTTAATGAATTTGGAGAAGCTGCAGACCTCCTAAGCTACGCTTGGCAATATTGGAGAGATGGGAGGCCGTTGGAATTGTTGGATTCAAATTTAAGAGATTGTTTGTCACCGGACCAAGTGATGAGATGCATACATATAGGCTTACTCTGTGCGCAGGATGATCCAAATGAGAGACCTACTATGCAGTCAATACTTCTTATGCTTAACAGTTATTCAATCACTCTAGGAACTCCTCAGATGCCAGGATTTTACCTGCACAGCAGAACGTAA 942 0.4013 MSTQEFLQFDLLTVREATSNFAIDNKLGEGGFGEVYKGTLPNGQDIAVKRLSRSSRQGAAEFKTEVLLVAKLQHRNLVRLLGFCLEGEEKLLVYELVPNKSLDHLLFDPEKRGLLDWSIRYKIVIGIARGMLYLHEDSRLRIIHRDLKASNILLDGDLNPKISDFGMAKIFGVDQTQANTSRIMGTHGYMSPEYAMHGQFSIKSDVYSFGVLILEIVTGKKNSSFNEFGEAADLLSYAWQYWRDGRPLELLDSNLRDCLSPDQVMRCIHIGLLCAQDDPNERPTMQSILLMLNSYSITLGTPQMPGFYLHSRT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00196 313 PIRSF ILK 12 303 - -
Pte5g00196 313 CDD STKc_IRAK 27 293 - -
Pte5g00196 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Pte5g00196 313 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Pte5g00196 313 SUPERFAMILY Protein kinase-like (PK-like) 6 308 IPR011009 -
Pte5g00196 313 ProSiteProfiles Protein kinase domain profile. 21 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00196 313 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 308 - -
Pte5g00196 313 FunFam Cysteine-rich receptor-like protein kinase 10 1 96 - -
Pte5g00196 313 FunFam cysteine-rich receptor-like protein kinase 10 97 299 - -
Pte5g00196 313 ProSitePatterns Protein kinases ATP-binding region signature. 27 49 IPR017441 GO:0005524
Pte5g00196 313 Gene3D Transferase(Phosphotransferase) domain 1 97 300 - -
Pte5g00196 313 SMART serkin_6 21 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00196 313 Pfam Protein tyrosine and serine/threonine kinase 23 289 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00196 Pte-Chr5 2092233 2093680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00196 1 312 Receptor kinase-like Gene Family AT4G23140 63.522 1.51e-150 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte5g00196 PK_Tyr_Ser-Thr 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00196 - - pop:18107164 494.197