Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00174 ATGGGTCACTCCAATGTTTGGAACTCTCATCCAAAGAACTATGGCCCTGGTTCTCGCACCTGGTTTGTGAAGAAATTGTGGGTAGTTATTGCTGGTTTTAGTCAAACTGTCAAAGCAATAGATTTACTCTCTTGGAAAAGGAACCGTGTCTGTGGGAACCCACACGGTTTGATCAGGAAGTATGGCCTTATGTGCTGCAGACAATGCTTCCGTAGCAATGCCAAGGAAATTGGATTCATCAAGTTTCTTTCATTCCTCATGAACACCTCCCTTCCAATAACCCCACCCAAACGTGTGCTGTCTAGCCTCACTATAGTATATGCTGTTGCCACTCAGTCAACTCCTGCGGGAATCTGTCTTGACGATGCCTAA 372 0.4543 MGHSNVWNSHPKNYGPGSRTWFVKKLWVVIAGFSQTVKAIDLLSWKRNRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKFLSFLMNTSLPITPPKRVLSSLTIVYAVATQSTPAGICLDDA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00174 123 Gene3D 30s Ribosomal Protein S14; Chain N 1 82 IPR043140 -
Pte5g00174 123 FunFam 40S ribosomal protein S29 44 83 - -
Pte5g00174 123 PANTHER 40S RIBOSOMAL PROTEIN S29 1 81 IPR039744 GO:0003735|GO:0008270
Pte5g00174 123 Pfam Ribosomal protein S14p/S29e 47 81 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00174 1 82 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 59.756 5.29e-27 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00174 K02980 - vri:117924536 108.997