Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00160 ATGGGCAAAGGCGATCCAGAGAACTATTGTGAGTGTACAAACCCTGCCACGAAGAGAAAAGCTTCAGGGAGCCACCACCACAATCCTCCGCAGCCAACTATGAAGAGGCGAGCTGTGCTCGGAGAGGTCACGAATTCCCTTGACGTTTCGTTGATTCAGAAACCCAATCTGGGAATCCAGAAGCTTCACGCTTCTAAACTACAAAATGTCAATAATGATCAGCAATCCGCGAAGAATTTCGTAGATTACACTTGCTTGAATCTCGAGAAGTCTACCTTCTCCTCCTCTTTATACAAACATCTTCGCGCTCTGGAGATGGATGTGAACAAAAGGCCATTACCTAATTACATGAGTAAGGTTCAACGAAGTGTGACAGAAAGCATGCGTGAAATTTTAATCGATTGGTTGGTGGAGGTGGCCGAAGAATACAAACTTGTTACTGATACGATCTTTCTAACTGTGTCCTACATTGATAGATTCCTCTCTGCAAATGCTATAGACAAGACCAAGCTTCAGCTTCTTGGTGTTTCAGCAATGTTAATAGCCTCAAAATATGAAGAGATTAGCCCTCCACATGCTGAAGACTTTTGCTATATAACAGATAATACTTACACCATGCAAGAGGTACTGAATATGGAGAGAGAGGTCCTGCAACTCTTGAACTTTGAGTTGGGAAGTCCCACGGCAAAAGTTTTTCTCAGAGCAGTGTGTGCCTCGGAAGAAAAGAATGTGATCGTTTAG 741 0.4332 MGKGDPENYCECTNPATKRKASGSHHHNPPQPTMKRRAVLGEVTNSLDVSLIQKPNLGIQKLHASKLQNVNNDQQSAKNFVDYTCLNLEKSTFSSSLYKHLRALEMDVNKRPLPNYMSKVQRSVTESMREILIDWLVEVAEEYKLVTDTIFLTVSYIDRFLSANAIDKTKLQLLGVSAMLIASKYEEISPPHAEDFCYITDNTYTMQEVLNMEREVLQLLNFELGSPTAKVFLRAVCASEEKNVIV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00160 246 Gene3D - 98 240 - -
Pte5g00160 246 SUPERFAMILY Cyclin-like 96 224 IPR036915 -
Pte5g00160 246 Gene3D - 112 225 - -
Pte5g00160 246 FunFam G2/mitotic-specific cyclin 112 225 - -
Pte5g00160 246 SMART cyclin_7 134 218 IPR013763 -
Pte5g00160 246 MobiDBLite consensus disorder prediction 14 33 - -
Pte5g00160 246 PANTHER CYCLINS 75 234 IPR039361 -
Pte5g00160 246 ProSitePatterns Cyclins signature. 129 160 IPR006671 -
Pte5g00160 246 Pfam Cyclin, N-terminal domain 98 224 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00160 Pte-Chr5 1790699 1792872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00160 7 234 Core Cell Cycle Gene Families AT1G47230 48.523 1.89e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00160 K06627 - zju:107426994 255.373