Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00158 ATGGAAGCTAAAAACTCTGTGAGGTTCACTTTGGGAAAGCAGTCATCTTTAGCACCAGAGAGGGCCAGCGAGGAGTCTGAACTTGACTTGCAGGGTATTCATCCTGGTGTGAGGCTGATGTATTTGGCTAATGAAAGTGATCTGGAAGGGATATGTGAGCTTTTAGATTCGGGAGTTGATGCGAATTTCAGGGATATAGATGATCGCACAGCTCTTCACATTGCAGCATGTCAAGGTTCTACTGATGTTGTCGCATTGTTGCTCAAGAAAGGTGCTGAGGTTGATGCGAAAGACCGGTGGGGAAGCACGCCTCTTGCAGATGCTATATTCTATAAAAAGCATGACGTGATCAAGCTGTTGGAAAAACATGGTGCCAAGCCTCTGATGGCACCAATGCATGTTAGACATTCCCGCGAAGTTCCAGAATATGAAATTGATCATAAAGAAATTGATTTTACCAACAGCGTTTACATCACCAAGGGAACCTTTTGTGTGGCAACTTGGCGTGGCATACAGGTTGCTGTCAAGAAGCTTGGAGAGGATGTGTTTTCTAATGAGGAAAAAGTGAATGCATTTAGAGATGAGCTTTCACTATTTCAAAAGATACGACACCCAAATGTTGTGCAATTTCTTGGTGCCGTGACTCAAAGTAGTCCAATGATGATAGTGACAGAATTTCTGCCCAAGGGAGATCTCTGTGCATATTTGAAGAGAAAAGGAGCTCTGAAACCACTTACAGCAGTGAGATTTGCCCTGGACATTGCAAGGGGGATGAGTTATTTGCATGAAAATAAACCTGCACCAATAATCCATCGTGATCTTGAACCTTCAAACATATTGCGGGATGATACGGGACATCTAAAAGTTGCCGACTTTGGAGTTAGCAAGTTAATGTCTGGCAAAGAAGATAAACCTTTAACTTGCCAAGACACTTCTTGCCGATATGTAGCTCCAGAGGTTTTCAGACAGGAGGAGTATGATACTAAAGTTGATGTGTTCTCATTTTCACTTATTCTGCAAGAGATGATAGAAGGCTGCCCGCCATTTTCGTCAAAAGAAGACATTGAAGTTCCAAAGGTTTATGCTGCAAAACAACGTCCTCCTTTCAGGGCACCAACTAAGCATTATTCATATGGGCTGAGAGAGTTGATTGAGGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTCGGCAAATAATAACAAGACTTGAATCCATCTACAAGACTCTTGGTCATAGAAGACACTGGAAGGTTAGACCATTGAAATGCTTTCTCAATCTAGAAGCTATTTTGAAAAGAGACAATTCAAATCCAAGTAGCCGCAATCGTTCATCCCATTCTTCAGCTGGCAGTATATGA 1365 0.4242 MEAKNSVRFTLGKQSSLAPERASEESELDLQGIHPGVRLMYLANESDLEGICELLDSGVDANFRDIDDRTALHIAACQGSTDVVALLLKKGAEVDAKDRWGSTPLADAIFYKKHDVIKLLEKHGAKPLMAPMHVRHSREVPEYEIDHKEIDFTNSVYITKGTFCVATWRGIQVAVKKLGEDVFSNEEKVNAFRDELSLFQKIRHPNVVQFLGAVTQSSPMMIVTEFLPKGDLCAYLKRKGALKPLTAVRFALDIARGMSYLHENKPAPIIHRDLEPSNILRDDTGHLKVADFGVSKLMSGKEDKPLTCQDTSCRYVAPEVFRQEEYDTKVDVFSFSLILQEMIEGCPPFSSKEDIEVPKVYAAKQRPPFRAPTKHYSYGLRELIEECWNENPAKRPTFRQIITRLESIYKTLGHRRHWKVRPLKCFLNLEAILKRDNSNPSSRNRSSHSSAGSI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00158 454 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
Pte5g00158 454 SMART ANK_2a 67 96 IPR002110 GO:0005515
Pte5g00158 454 SMART ANK_2a 100 129 IPR002110 GO:0005515
Pte5g00158 454 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515
Pte5g00158 454 ProSiteProfiles Protein kinase domain profile. 117 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00158 454 CDD STKc_MAP3K-like 158 405 - -
Pte5g00158 454 FunFam serine/threonine-protein kinase STY46-like 145 228 - -
Pte5g00158 454 Gene3D - 8 143 IPR036770 -
Pte5g00158 454 FunFam Integrin-linked protein kinase family 19 143 - -
Pte5g00158 454 Pfam Ankyrin repeats (3 copies) 39 127 IPR002110 GO:0005515
Pte5g00158 454 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 143 410 - -
Pte5g00158 454 Gene3D Phosphorylase Kinase; domain 1 144 227 - -
Pte5g00158 454 SUPERFAMILY Protein kinase-like (PK-like) 152 406 IPR011009 -
Pte5g00158 454 Pfam Protein tyrosine and serine/threonine kinase 168 405 IPR001245 GO:0004672|GO:0006468
Pte5g00158 454 FunFam Os01g0748600 protein 138 425 - -
Pte5g00158 454 SUPERFAMILY Ankyrin repeat 37 128 IPR036770 -
Pte5g00158 454 PIRSF ILK 1 427 - -
Pte5g00158 454 Gene3D Transferase(Phosphotransferase) domain 1 228 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00158 Pte-Chr5 1773491 1780259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00158 8 426 MAP Kinase Kinase Kinase AT4G18950 69.718 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pte5g00158 PK_Tyr_Ser-Thr 1.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00158 - - gmx:100790126 733.791